Gene Bcav_1707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1707 
Symbol 
ID7859649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1953835 
End bp1954995 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content70% 
IMG OID643865795 
Productcarbohydrate-binding protein 
Protein accessionYP_002881725 
Protein GI229820199 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.258357 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCCC GCGCACGCAC GTACCGCCGC GTCGTCCCCG CCGCCGCGAC GACCATCGCC 
GTGACGGCGG CGCTCGCCGC GTGCGGCGCG AGCGGCGAAG GAGCCCCCGT GGACACCGAG
ACCGACAAGC CGTTCGTGAT CAGCGGCGTC GAGAACGTCA CCCAGGTCGC GCAGCTGACC
GGGCCGGACT CCACGCTCAA CGACACGGAC GCCGTCGCCG TCGCCGGCAC CGACCTCGGG
TCGATGATCA ACGTCGGCGA CCGCACGTAC TTCCTCTTCG GCGACACGTT CGGCGTCCGC
GAGCCGGGGA TGACCGGCGG CGGTGGCGGG AACTGGCGCT CCAACGCCAT GGCCTACACC
ACCGACGACG ACCCGACCGA CGGCATCACG TTCGACGGCT GGATCACCGA CGACATCGGG
CTCGCGCTCG AGCTCGTGCC CGGTCTCAAG GAGCCGGACG ACACGGGCGA GGTCACGAAG
ATCCCGACGT ACGGGTTCGC GATCGAGGAC ACGCTCTACC TGTCGTTCAT GTCCGTCCGG
CACTGGGGCG ACCCGGGCGT CTGGACGGCG AACTACTCCG CGCTCGCCCG GTCCACGGAC
GAGGGTCAGT CGTGGGAGGT GCTGGACGAC GTCCAGTGGC CCGGGGACTC GAACTTCATC
CAGGTGGCGA CGGCGCAGGT CGTCGAGGAC GGCACGGAGT ACGTCTACCA GTGGGGCATC
CCCGCCGGCC GGTTCGGCGG CGTCCAGCTG ATGCGCGTCG AGGCGACCAC CGACGCCGTG
GAGGACCTCG GCGCCTACGA GTACTTCACG GGCACCGACG ACGACGGCGC GCCGGTCTGG
AGCGAGGACC TGGACGAGGC CGAGACCGTG CTCGACGGCA CGATCGGCGA GCTCTCGGTG
ATGTACCACG AGCAGACGGA GCGCTGGCTG CTGACGACGT CGACGGGCGG CGACGCCGTC
CTGTTCGAGG GCGCGACGCC GTGGGGGCCG TGGTCCGAGC CGCACACGAT CACCACCCAG
GCCGAGACAC CGGGGCTGTA CTCGCCGTAC CTCAACCCGC GGTACGTCTC CGAGGACGGC
TCCACCCTCT ACTTCACGCT CTCGATCTGG GATCCGTACA ACGTGTTCTG GTACGCGATG
GACCTGGTGA CCGAGTCATG A
 
Protein sequence
MSARARTYRR VVPAAATTIA VTAALAACGA SGEGAPVDTE TDKPFVISGV ENVTQVAQLT 
GPDSTLNDTD AVAVAGTDLG SMINVGDRTY FLFGDTFGVR EPGMTGGGGG NWRSNAMAYT
TDDDPTDGIT FDGWITDDIG LALELVPGLK EPDDTGEVTK IPTYGFAIED TLYLSFMSVR
HWGDPGVWTA NYSALARSTD EGQSWEVLDD VQWPGDSNFI QVATAQVVED GTEYVYQWGI
PAGRFGGVQL MRVEATTDAV EDLGAYEYFT GTDDDGAPVW SEDLDEAETV LDGTIGELSV
MYHEQTERWL LTTSTGGDAV LFEGATPWGP WSEPHTITTQ AETPGLYSPY LNPRYVSEDG
STLYFTLSIW DPYNVFWYAM DLVTES