| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1651 |
|---|
| Symbol | |
|---|
| ID | 7859593 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 1893798 |
|---|
| End bp | 1894457 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 643865739 |
|---|
| Product | Lysine exporter protein (LYSE/YGGA) |
|---|
| Protein accession | YP_002881669 |
|---|
| Protein GI | 229820143 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1279] Lysine efflux permease |
|---|
| TIGRFAM ID | [TIGR00948] L-lysine exporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.302942 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.115475 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTGTA CTTCATGGCC CCGTCTCCGT AGCGTCGCTC CCGTGCCCGC CTCGGTCCTC
GCCACGCTCT CCGGCCTCGT GACCGGCCTG GGGCTCATCG TCGCGATCGG CGCCCAGAAC
ACGTTCGTGC TGCGCCAGGG CCTGCGCCGG GAGCACGTCG GCCGGGTGGT GGCGGTGTGC
CTGCTCTCCG ACGTCGCGCT GATCGTGGCC GGCGTGGGAG GCATCGGCAC GCTCGTGGAG
CGGCTGCCCG CCGTCGTCAC CGTGCTGACC TGGGCGGGCG CGGCGTTCCT GGCCGGGTAC
GGCGTGCTCG CCGCACGCCG GGCGTTGTCC CCGGACGGGG CTCTCGGCGA CGCCGCGCCA
CCCCCGACGT CCGGCCGGTC GGCGGTCGCC GTCGCCGCCG CGCTCACCTG GCTCAACCCC
CACGTCTACC TCGACACGGT GGTCCTGCTC GGTTCCGTCG CGAACGCGCA GCCGGGCGTG
CTGCGGTGGT GGTTCGCCGC CGGGGCCGTC GTGGCGAGCG CCGTCTGGTT CGGGGGCCTC
GGATTCGGAG CGCGGCTGGT GGCCCCAGCG CTCGCGCGCC CGAACGCCTG GCGCATCCTC
GACGGCGCGA TCGCCGTCGT CATGCTCACG CTCGCGGTGC TGCTGGTGCT GCGCGCGTAG
|
|---|
| Protein sequence | MSCTSWPRLR SVAPVPASVL ATLSGLVTGL GLIVAIGAQN TFVLRQGLRR EHVGRVVAVC
LLSDVALIVA GVGGIGTLVE RLPAVVTVLT WAGAAFLAGY GVLAARRALS PDGALGDAAP
PPTSGRSAVA VAAALTWLNP HVYLDTVVLL GSVANAQPGV LRWWFAAGAV VASAVWFGGL
GFGARLVAPA LARPNAWRIL DGAIAVVMLT LAVLLVLRA
|
|---|
| |