Gene Bcav_1458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1458 
Symbol 
ID7860927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1663050 
End bp1664330 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content70% 
IMG OID643865545 
Productaminotransferase class-III 
Protein accessionYP_002881478 
Protein GI229819952 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0001] Glutamate-1-semialdehyde aminotransferase 
TIGRFAM ID[TIGR00713] glutamate-1-semialdehyde-2,1-aminomutase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACCG TCATCGACTC GATCTCCGCC CGACTGGATC GCCGCGCCCG CCAGCACGTG 
CCCGGGGGAG TGAACTCGAA CGTCCGCCTC GCCGCACCCC ACACCTACTT CGAGCGCGGG
GTGGGCGCTC GCCTGTTTGA CGTCGACGGC CGTGACTATG TGGACTACCT GCTGGGACAG
GGCCCCAACA TCCTCGGCCA CGCGCCGGAG AAGCTGCAGT CGGACGTGGC GCAGGCGGTC
CGACGGGGCA TGCTGTACGG CGCGCAGCAC GAGGCCGAGG TTCTGGCCGC GGAGCAGGTG
TGCGAGATCC TCGAGTGGCC GGAGATGGTC CGCTTCGGCG TCTCCGGCAC AGAGAGCGTG
CAGGCAGCGC TCCGCCTGGC CAGAGCCGAG ACCGGAAGGC GGCGGTTCAT CCGCTTCGAG
GGCCACTATC ACGGGTGGCT GGACACGACC CTCGCGTCGT GGTCGCCCGA CGGCGAGTGC
TCGCCCGCGA GTGCGGGCCA GCTGTCGGAT CACCTCGCCG AGGCGATTCC TACGCCGTGG
AACGATCTCG AAGCGGTTCG CCTTCAGCTC GAGCAGCACG ATGACGTGGC GGCCATCATC
ACCGAGCCGG TGATGCTCAA CGCCGGCTCG ATCGTGCCCC GGGACGGGTA CCTGGAAGGG
CTGCGGGAGC TCGCCGACGC CTTCGGTGTG GTGCTCATCT TCGACGAGGT CATCACCGGC
TTCCGCGTCG CCCTCGGCGG AGCAGCCCAG CGGTACGGCG TCACGCCGGA CCTGGCGGTC
TACGGGAAGG CCATGGCCGC CGGCTGGCCC GTCAGCATGC TCGCCGGTCG GGCCGACCTC
ATGGAGAGGT TCGGGTCCGG CGAGGTCAAT CACTCGGGCA CGTTCAACGC GTCGGTGATG
GCGACTGCGG CGACGCTGAG CGCGACGACC ATTCTGCGGG AGGACGACCC GTACGCCCGG
ATGGAGGCGT ACGGCGAACG GCTCATGGAC GAGGTCCGGG GCTCCGCGGC GCGGCACGGT
CTTGGTCTGC ACGTCCAGGG TCTGGGTATG GCGTTCCACG TCTCGTTCTC GGACGGGAAG
GCGATCTGTG ACTATCGCGA CCTGGGCCGC ACGGACACGG AGCGGTACGG GCGGCTCTCT
CGTGTCCTCG CCGACCATGG CGTCTGGGTC GCGGGACGCG GGGTCTGGTA CGTCAGTGCC
GCACACGACG AGCGCGACAT GGCCGACACC CTGACCCGCG TGGACCAGGC GTTCGCGGAG
TTCGCCCGGC ACGAACGATG A
 
Protein sequence
MSTVIDSISA RLDRRARQHV PGGVNSNVRL AAPHTYFERG VGARLFDVDG RDYVDYLLGQ 
GPNILGHAPE KLQSDVAQAV RRGMLYGAQH EAEVLAAEQV CEILEWPEMV RFGVSGTESV
QAALRLARAE TGRRRFIRFE GHYHGWLDTT LASWSPDGEC SPASAGQLSD HLAEAIPTPW
NDLEAVRLQL EQHDDVAAII TEPVMLNAGS IVPRDGYLEG LRELADAFGV VLIFDEVITG
FRVALGGAAQ RYGVTPDLAV YGKAMAAGWP VSMLAGRADL MERFGSGEVN HSGTFNASVM
ATAATLSATT ILREDDPYAR MEAYGERLMD EVRGSAARHG LGLHVQGLGM AFHVSFSDGK
AICDYRDLGR TDTERYGRLS RVLADHGVWV AGRGVWYVSA AHDERDMADT LTRVDQAFAE
FARHER