Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_1434 |
Symbol | |
ID | 7860903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 1635121 |
End bp | 1635846 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 643865521 |
Product | GntR domain protein |
Protein accession | YP_002881454 |
Protein GI | 229819928 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.809265 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGACGT CGCGCAGCAC TCGCGCCCTC GCGAGCCAGG CCGACGTGCG CGGCCGCATC CGCACCCTCA TCGTCGAGCG CGGTCTCGGC CCCGGCGACC TGCTCCCGAC AGAGCCCGAG CTCATGGCGA CGCTCGGGGT CTCCCGCAAC TCGCTGCGCG AGGCGATCAA GGGACTCCAG GCGGTCGGGA TCGTGGACGT GCGCCACGGG TACGGCACGT ACGTCGGCGC CGGTGACCTG CAGTCCCTCG AGGACGGCCT GAGCTTCCGG CTCGCGGTGT CGCTCGACCG GGACCTGCGG GACGTCCGCG AGCTGCTCCA GGTGCGTCGC GCGCTCGAGG TCGGGCTGGC GCGTGAGGTC ACCGCGTACT GGTCGACGCA CCCGATGGAC CCGCTGAGCG ACGTCGTCGC GGAGATGGAG GCGGCTGCAG CGTCCGGTCA GTACTTCCCC GACGAGGACT GGCGGTTCCA CGCCGCCCTG TACGCGCCCC TCGACAACCG CCTGATCCTC GAGCTGCTGC GCGTGTTCTG GCGGACGTTC CACGAGATCG ACCCGCGCCT GCCAGGTCCG CGGTACACGC CGTCCGACGC CGCCGGATGG CACCGCCGCA TCTGCGATGC GCTCGCGGCC GGCGACCCGG ACGCGGCGGC GGTCGCGATG GCTGACCACT TCTCCGGGAT CAGCGTCCGC CTCGCGACGG CCGACGGCGC CGAGCCCGCC GGGTAG
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Protein sequence | MGTSRSTRAL ASQADVRGRI RTLIVERGLG PGDLLPTEPE LMATLGVSRN SLREAIKGLQ AVGIVDVRHG YGTYVGAGDL QSLEDGLSFR LAVSLDRDLR DVRELLQVRR ALEVGLAREV TAYWSTHPMD PLSDVVAEME AAAASGQYFP DEDWRFHAAL YAPLDNRLIL ELLRVFWRTF HEIDPRLPGP RYTPSDAAGW HRRICDALAA GDPDAAAVAM ADHFSGISVR LATADGAEPA G
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