Gene Bcav_1434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1434 
Symbol 
ID7860903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1635121 
End bp1635846 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content73% 
IMG OID643865521 
ProductGntR domain protein 
Protein accessionYP_002881454 
Protein GI229819928 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.809265 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGACGT CGCGCAGCAC TCGCGCCCTC GCGAGCCAGG CCGACGTGCG CGGCCGCATC 
CGCACCCTCA TCGTCGAGCG CGGTCTCGGC CCCGGCGACC TGCTCCCGAC AGAGCCCGAG
CTCATGGCGA CGCTCGGGGT CTCCCGCAAC TCGCTGCGCG AGGCGATCAA GGGACTCCAG
GCGGTCGGGA TCGTGGACGT GCGCCACGGG TACGGCACGT ACGTCGGCGC CGGTGACCTG
CAGTCCCTCG AGGACGGCCT GAGCTTCCGG CTCGCGGTGT CGCTCGACCG GGACCTGCGG
GACGTCCGCG AGCTGCTCCA GGTGCGTCGC GCGCTCGAGG TCGGGCTGGC GCGTGAGGTC
ACCGCGTACT GGTCGACGCA CCCGATGGAC CCGCTGAGCG ACGTCGTCGC GGAGATGGAG
GCGGCTGCAG CGTCCGGTCA GTACTTCCCC GACGAGGACT GGCGGTTCCA CGCCGCCCTG
TACGCGCCCC TCGACAACCG CCTGATCCTC GAGCTGCTGC GCGTGTTCTG GCGGACGTTC
CACGAGATCG ACCCGCGCCT GCCAGGTCCG CGGTACACGC CGTCCGACGC CGCCGGATGG
CACCGCCGCA TCTGCGATGC GCTCGCGGCC GGCGACCCGG ACGCGGCGGC GGTCGCGATG
GCTGACCACT TCTCCGGGAT CAGCGTCCGC CTCGCGACGG CCGACGGCGC CGAGCCCGCC
GGGTAG
 
Protein sequence
MGTSRSTRAL ASQADVRGRI RTLIVERGLG PGDLLPTEPE LMATLGVSRN SLREAIKGLQ 
AVGIVDVRHG YGTYVGAGDL QSLEDGLSFR LAVSLDRDLR DVRELLQVRR ALEVGLAREV
TAYWSTHPMD PLSDVVAEME AAAASGQYFP DEDWRFHAAL YAPLDNRLIL ELLRVFWRTF
HEIDPRLPGP RYTPSDAAGW HRRICDALAA GDPDAAAVAM ADHFSGISVR LATADGAEPA
G