Gene Bcav_1401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1401 
Symbol 
ID7861701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1595507 
End bp1596382 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content73% 
IMG OID643865485 
ProductABC transporter related 
Protein accessionYP_002881422 
Protein GI229819896 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACACCG TGAGCACAGC GAACAGCTCG ACGACCACCC CTCCGGCCGC CGGCGGCGAC 
CCGGACGGCG TCGTGCTCGA GGCGAGGAGT CTCGTCAAGG AGTTCCGCGC GGCCGGCGGG
CGGCGGTTCG GCCACGCCGC GACGTTCCGT GCCGTCGACG ACGTCTCGTT CGAGCTGCGA
CGCGGCCGCA CGACGGCGCT CGTGGGGCAG AGCGGGTCGG GCAAGTCGAC CGTCGGTCGG
CTCATGGCGC AGCTGCACCC GCTGACGTCC GGGGAGATCC TGCTCGACGG CCAGCCGGTG
CACGCCGTCC GGGGCAAGGC GTTCACGCGG TACTGCGGGT CGGTGCAGAT GATGCTCCAG
GACCCGTTCG CGTCGCTCAA CCCGCTGCAC CGGGTCGAGC ACGTGCTCGG GCGGGTGCTC
CGCATCCACG GGCACGCACG CACGCCCGAG GAGGTGCGGG AGCAGAGCCT GGCCCTGCTC
GAGAGGGTGA ACCTCCGGCC GTCGACGCGC TACCTCACGC GGTTCCCGCA CGAGCTTTCC
GGCGGTGAGC GGCAGCGCGT CTCGGTGGCG CGGGCGCTCG CCGCGCAGCC GCGGGTTCTG
CTCGCCGACG AACCGGTGTC GATGCTCGAC GTGACGATCC GGCGGGAGAT CCTCGACCTC
ATCGACACGC TGCGCCGGGA GGAGCGGATC GCCGTCCTCT ACATCACGCA CGACCTGGGG
AGCGCACGGG CGTACTCCGA GGAGACGCTG GTGATGTACC ACGGCAAGGT CGTGGAGCGC
GGGCCCAGCG AGCAGGTCAT CTCCGACCCG CAGCACGAGT ACACGCAGCG GCTGCTCGCC
GCCTCGCCGG ACCCCGCGCG CCGCCTCGCC CGCTGA
 
Protein sequence
MNTVSTANSS TTTPPAAGGD PDGVVLEARS LVKEFRAAGG RRFGHAATFR AVDDVSFELR 
RGRTTALVGQ SGSGKSTVGR LMAQLHPLTS GEILLDGQPV HAVRGKAFTR YCGSVQMMLQ
DPFASLNPLH RVEHVLGRVL RIHGHARTPE EVREQSLALL ERVNLRPSTR YLTRFPHELS
GGERQRVSVA RALAAQPRVL LADEPVSMLD VTIRREILDL IDTLRREERI AVLYITHDLG
SARAYSEETL VMYHGKVVER GPSEQVISDP QHEYTQRLLA ASPDPARRLA R