| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1345 |
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| Symbol | |
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| ID | 7861645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 1535162 |
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| End bp | 1537432 |
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| Gene Length | 2271 bp |
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| Protein Length | 756 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 643865429 |
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| Product | glycogen debranching enzyme GlgX |
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| Protein accession | YP_002881366 |
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| Protein GI | 229819840 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.412399 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAGACT GGCCGGCGAT GACCGCCAGC CCCCAGACCG TGCGCCCCGC AGCTCGAGCT
GCCCGGGGTG CCTCCCTGCC GCACCGCTTC GGCGCGCACG TGGTCGACGG CGGGATCGAC
GTCGTCGTCG CCGCCCCGCA CGCCGAGGCC GTGGACCTGT GCCTGCTCGG CGACGACGGC
GAACGTCGGG TGGGTCTGCG GCGACGCGCC TTCGGGGTGT GGGACGCGCA CGTGCCGGGC
GTCGGCGCCG GCCAACGGTA CGGGCTGCGG GTGCACGGTC CGTGGGATCC CGCCGCCGGC
CTGTTCCACA ACCCGGCGAA GCTGCTCCTC GACCCGTACG CCCGCGGCGT CGTCGGCGAC
CTGCGGCTCA GCCCGGAGAT CTTCGGGCAC GTCACCGAGG CGGACGGGGC CGGCGACCTC
GCCCTGCCTG ATCACCGGGA CTCCGCCCCG TTCGTGCGCC ACGGCGTGGT CGTGCCGAGC
CACCGGCCGC CCGTGCGGCG GCCGCGTGTG CCGTGGTCGG AGACGGTCGT GTACGAGGCG
CACGTCCGCG GGCTGACCCT GGACCTCCCG GGCGTGCCGG AGCACCTGCG CGGCACGTAC
GCCGGCCTCG CCCACCCCGC GACGATCGAG CACCTGCGCC GGCTCGGCGT CACCACGCTC
GAGCTGCTCC CGATCCACGC GATCGCCTCG GAGACGGCGC TGCTCGAGCG GGGTCTCGTC
AACTATTGGG GCTACTCCAC GCTCGCGTTC TTCGCACCCG AGCCGCGGTA CGCCACGACC
GCCGCCCGCT CGGCCGGCCC GGCGGCCGTG CTGGCCGAGG TCACGGGGAT GGTCTCGCTG
CTGCACGACG CGGGGATCGA GGTGCTGCTC GACGTCGTCT ACAACCACAC GTGCGAGCAG
GGGCTCGACG GGCCGCTGCT GTCCTGGCGC GGGCTCGACA ACACCGGCTA CTACCTGCAC
GACGGCTCCT CACCGGCGCG GTACGCCGAC GTCACCGGAA CCGGGAACTC CCTCGACTTC
CGCCGCCAGC GCGTGGTGCA GCTCGCCCTC GACTCGCTGC GGTACTGGGC CGAGGAGGTG
GGCGTGGACG GGTTCCGGTT CGACCTCGCC GTCACGCTCG GCCGGCGGGC CGGTGCGTTC
GAACCGGACC ACCCGTTCCT CGTCGCGCTC GCGAGCGACC CGACGCTCGG TGGGCTCAAG
CTCGTCGCGG AACCGTGGGA CGTCGGCCCC AGCGGCTGGC GCACGGGCGC GTTCCTCCCG
CCGATGCGCG AGTGGAACGA CAGGTTCCGC GACGCGACAC GGCGCTTCTG GCTCGCCGAC
CCGCGCACCG CCGCGGCCGG CGACGGCGCC ACGCACGACC TCCGCGATCT CGCGACCCGG
TTGTCCGGCT CCGCCGACCT GTTCGGGCAC GGCGGCGGCG GCTCGCGCGG CCCCCTCGCC
AGCGTGAACT ACGTGACGGC GCACGACGGC TTCACGCTCG CCGACCTCGT CGCGTACGAC
CACAAGCACA ACGAGGCGAA CGGCGAGGGC GGGCGCGACG GCTCGGACCA CAACCTGTCC
TGGAACCACG GGATCGAAGG GCCGGTCCGG GACGAGGACC CGGGCGGCGA GATCCTCCCC
CTGCGGCGCC GCTCGATCCG CAACCTGCTC GCCACGCTGC TCGTGTCCGC CGGCGTGCCG
ATGCTCACGG CCGGCGACGA GGTGGGCCGC ACGCAGCGCG GCAACAACAA CGCGTACTGC
CAGGACTCGG AGCTGTCCTG GGTGAGCTGG GAGATCTCCG AGTGGCGCTC CGACCTGCTC
GCCACGTCCC AGTACCTGCT CGCCCTGCGC CGGGAGCACG CGGCGCTGCG GCCCGTCCGC
TTCGCGCGCG GCCGGCCCCG CCGGGACGAC ACGCTCGACG ACCTCGCCTG GTTCGGCTCC
GACGGCACCG CGCTGGACCA CGACGCCTGG CACGACCCCG CTCGCCGGCT GCTGCAGATG
CGGCGGTCGG GGCGGTCCCT GCCGGACCCG CTCTCCGGCG CCGAGCCAGC CGAGCCCGCC
GCGCCCGCGC CGCGCGACGT GCTCGTGGTC CTGAACGGCG CCCTGGAGCA GGACGACGTC
GTGCTCGCGC CCGCGCGCAC CGGCTGGGAG CTCGTCTGGG ACTCGACGTG GGAGCACCCG
GGCGAGCTCG CGACGTCGGC GATCAACGGC GTCCTGCACC CCGCGGACGG CTCGATCGTG
CCCCTCGACG CCCTGAGCAT GCGGATCTAC CTCGAACGGC GGACGCCCTG A
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| Protein sequence | MGDWPAMTAS PQTVRPAARA ARGASLPHRF GAHVVDGGID VVVAAPHAEA VDLCLLGDDG
ERRVGLRRRA FGVWDAHVPG VGAGQRYGLR VHGPWDPAAG LFHNPAKLLL DPYARGVVGD
LRLSPEIFGH VTEADGAGDL ALPDHRDSAP FVRHGVVVPS HRPPVRRPRV PWSETVVYEA
HVRGLTLDLP GVPEHLRGTY AGLAHPATIE HLRRLGVTTL ELLPIHAIAS ETALLERGLV
NYWGYSTLAF FAPEPRYATT AARSAGPAAV LAEVTGMVSL LHDAGIEVLL DVVYNHTCEQ
GLDGPLLSWR GLDNTGYYLH DGSSPARYAD VTGTGNSLDF RRQRVVQLAL DSLRYWAEEV
GVDGFRFDLA VTLGRRAGAF EPDHPFLVAL ASDPTLGGLK LVAEPWDVGP SGWRTGAFLP
PMREWNDRFR DATRRFWLAD PRTAAAGDGA THDLRDLATR LSGSADLFGH GGGGSRGPLA
SVNYVTAHDG FTLADLVAYD HKHNEANGEG GRDGSDHNLS WNHGIEGPVR DEDPGGEILP
LRRRSIRNLL ATLLVSAGVP MLTAGDEVGR TQRGNNNAYC QDSELSWVSW EISEWRSDLL
ATSQYLLALR REHAALRPVR FARGRPRRDD TLDDLAWFGS DGTALDHDAW HDPARRLLQM
RRSGRSLPDP LSGAEPAEPA APAPRDVLVV LNGALEQDDV VLAPARTGWE LVWDSTWEHP
GELATSAING VLHPADGSIV PLDALSMRIY LERRTP
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