Gene Bcav_1317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1317 
Symbol 
ID7858780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1492729 
End bp1493790 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content75% 
IMG OID643865401 
Producttranscriptional regulator, LacI family 
Protein accessionYP_002881338 
Protein GI229819812 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACGA TCGGTGACGT CGCCCGGCAC GCCGGCGTGG CGACGTCGAC CGTCTCGTAC 
GTGCTGTCCG GCAAGCGCGC GACGTCGCCC GCGACGCGGG AGCGCGTGCG GCGCGCCATC
GCCGAGCTCG GGTACCGCCC GCACGCGGGT GCGCGCGCCC TGGCGTCGGC ACGCACGCAG
GTGCTCGCGC TCATGGTGCC GCTGCGGCTC GACGCCGGAG GCCGCGGTCC GCGCAGCGAC
CTCGACCTCG ACGTGGTCAT GCAGTTCGTC GCGGGCGTGG CGCCACGGGC TCGCTCGCTC
GGATACGACG TGCTCCTCCT CACCGACGAC GACCCGACGG CGGTCGGCCG CGTCTCCGTC
TCCTCGTCCG CCGACGCGCT CATCGTCATG GACGTCGAGG TGGACGACGC CCGCATCCCG
GCCGTCGTGG CGGCCGGCAC ACCGACCGTG CTCATCGGCC TGCCCGACGA GCAGTCCGGG
CTCAGCTGCG TGGACTTCGA CTTCGAGCAG GCCGGGCGCC TCGCGGTGCG GCACCTGGCC
CGTCTCGGGC ACCGGGTGCT GGCGTTCGTC GGCCCTCCGC CCGCCGCGCT GAGGCGCCGG
ACGTCCTACG CCGAGCGGAT GCTGCGCGGG CTGCGTGCGC AAGCCGCCAG CAGCGAGGTC
GAGCTGCGGA TCGCACCCGC AACGGCCAGC CGCGACGACG TCGTGCACGC GATCGCGGAG
GCGCTCGACA CCGAATCAGG CGCGACTGCC CTGGTGGTGC ACAACGAGGC TGCCCTCCCG
ATCGTCCTCG ACGTGCTCGC CGAGCGTGGC GTCCGCGTGC CCGCGGACGT GTCCGTCATC
GCCGTGGGCG TGAGCGGCGT GGCCGAGCAG CGGGTCGGCG TGCTCACCTC GATCGACATC
CCCGGCCGCG CGATCGGCGC CGTGGCGGCC GAGATGGTGG TGGCGGCGCT CGGCGGGGCG
GTCCGCGCGG AGACCCGCCT CGTGCGGGCG AACCTCACCG ACCGGGGCAC CACGGCCCGC
CCGCCCGCGC GACGACGTCC CACGAGCCAG GAGAACAGCT GA
 
Protein sequence
MTTIGDVARH AGVATSTVSY VLSGKRATSP ATRERVRRAI AELGYRPHAG ARALASARTQ 
VLALMVPLRL DAGGRGPRSD LDLDVVMQFV AGVAPRARSL GYDVLLLTDD DPTAVGRVSV
SSSADALIVM DVEVDDARIP AVVAAGTPTV LIGLPDEQSG LSCVDFDFEQ AGRLAVRHLA
RLGHRVLAFV GPPPAALRRR TSYAERMLRG LRAQAASSEV ELRIAPATAS RDDVVHAIAE
ALDTESGATA LVVHNEAALP IVLDVLAERG VRVPADVSVI AVGVSGVAEQ RVGVLTSIDI
PGRAIGAVAA EMVVAALGGA VRAETRLVRA NLTDRGTTAR PPARRRPTSQ ENS