Gene Bcav_1208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1208 
Symbol 
ID7858864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1370894 
End bp1372480 
Gene Length1587 bp 
Protein Length528 aa 
Translation table11 
GC content78% 
IMG OID643865292 
Producthypothetical protein 
Protein accessionYP_002881230 
Protein GI229819704 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.560669 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCC CGCCCGTGAC ATCCCGCATC GGACCGCGGC TGCGCACCGC CCTGCGCCGG 
CTGGGGGCGA CGTCCAGCGC GCTCGTCGTG CTGGCCGGCG TCGCGGCCGT CACGGCGATC
GGGACGGCCG ACGACGCCGG CCCGGGTGAG GTGGTCCCGC CGACCCGGGT GGACGTGCCG
CCGTCAGAGC TCGCCCTCGT CTGCCCGGGC CCGCCCCGCC TGGCGACCGC GGACCTCGGC
GGCGACATCA CGTACGACCC GGAGTTCGAC GCCGCACCCG CGCAGACGCA GGTGCGGCAG
GACGGGTTGA CCCTGCGCCG TGACGACGAG GACGCGCCAG CCGCCGGCAC GATCGGCCCG
CTCGCTCCCG ACGGCGGGAC GGCGCTGGAC GCCGGAGGCG ACGCGGCAGT GGCGAGCGTC
GCCGACGTCG CGGGCGCCGG AGTGGTGCGC GCCGACCCGG TCGGGGACAG GTCGGCGTTC
GGGGTGGGCG CGACGCTGGC CCGGACCGAC GCCGGCGACC TGCGCGGCCT CGTCGCCGCG
CCGTGCCTCC CGGCGTCGTC GACGGTGTGG CTGGTCGGCG GCAGCACGGC GCTCGGGGCG
AGCACGCGGC TCGTCCTCGC CAACCCGGGC ACGACCCCGG CCACGGTCAC CGTGACGGCG
TGGGGGGCGA CCGGGCCGCT CGCGATGGAG CGGGCCAGCG GTCTGCTGGT GGCGCCGGGG
GAGGAGACGG CGATCCTGCT CGAGGCGGTC GCCACGGGCG AGGAGCGGAT CGCCGTCCGC
GTGGACGCCG CGGGCGGCCG GGTCAGCGCC ACGCTCCAGG AGTCGCAGCT GCGGGGTCTC
GTCGCCGGCG GCACGGACCT GGTCAGCGCC GCGGCGGATC CGGCCACCTC GCTGCTGGTC
CCCGGCATCA CGCTGGCCGA GACCGAGGTC GACGACCCGG AGCCGAGCGT GCTGCGCGTG
CTCAACCCCG GCGACGAGCG TGCCAGGGTG ACGTTGCGGC TGCTGGGCGC GGACGGGGAG
AACGTCGTGC CGGGTGCGCA GGACCAGGTG CTCGAGCCGG GCACGGTGAC CGACGTGTCG
CTCGCGGGCC TGCCGGCCGG CTGGTACACG GCCGAGCTCA CGTCGGACGT GCCGGTCACG
GCCGGGGCGT CCCTGGTGCG CGTGGGGGAG CCCGGCGAGG ACGACCCGGA CCAGCCGGTG
GTCGAGCGGG CCTGGGTCGC CGCGGTCGAC CCGGTGACGT CGGGAGCCGT CGTCGCCGAC
ACGGGCGGCG ACGTCGTCGA GGCGGCCAGG CTGGTCGTCG GGAACCCCGG CGCGGAGGCG
GTGACGGTGA GCGTCACCGG CTACGGCCGG GACGGCGGCA CCACCGACCC CGTCGACCTC
ACCGTGGCGG CGCGCTCCAG CGAGACGCTC GACGTCGCCG ACCTCGGGGA GGGTGTGCTG
GGCGTCCGGC TCGCGAGCCC GAGCGCGGTG TCCGGGGCCA TGCTCCTGTC GGCCGAACCC
GGCGACGGCA CCATGTTCTC GATCCTCCCG GTCACGCCCG ACCCGGATCA GCGCCAGAGC
GTGGACGTGC GGCTCGGCCC GGGCTGA
 
Protein sequence
MATPPVTSRI GPRLRTALRR LGATSSALVV LAGVAAVTAI GTADDAGPGE VVPPTRVDVP 
PSELALVCPG PPRLATADLG GDITYDPEFD AAPAQTQVRQ DGLTLRRDDE DAPAAGTIGP
LAPDGGTALD AGGDAAVASV ADVAGAGVVR ADPVGDRSAF GVGATLARTD AGDLRGLVAA
PCLPASSTVW LVGGSTALGA STRLVLANPG TTPATVTVTA WGATGPLAME RASGLLVAPG
EETAILLEAV ATGEERIAVR VDAAGGRVSA TLQESQLRGL VAGGTDLVSA AADPATSLLV
PGITLAETEV DDPEPSVLRV LNPGDERARV TLRLLGADGE NVVPGAQDQV LEPGTVTDVS
LAGLPAGWYT AELTSDVPVT AGASLVRVGE PGEDDPDQPV VERAWVAAVD PVTSGAVVAD
TGGDVVEAAR LVVGNPGAEA VTVSVTGYGR DGGTTDPVDL TVAARSSETL DVADLGEGVL
GVRLASPSAV SGAMLLSAEP GDGTMFSILP VTPDPDQRQS VDVRLGPG