Gene Bcav_1184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1184 
Symbol 
ID7860643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1334458 
End bp1335558 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content72% 
IMG OID643865268 
ProductDegT/DnrJ/EryC1/StrS aminotransferase 
Protein accessionYP_002881206 
Protein GI229819680 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.375079 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCCA TCTCCGTCGT GCGCCTCGGC GCCGAGACCG AGAGCCTCGT GCTCGACGTC 
ATCCGCTCGG GCATCATCGC CCAGGGCCCG AAGGTCGCCG AGCTCGAGTC GCGCTTCGCC
GAGCTCGTCG GCGCGGAGCA CGCGGTGGCG GTGAACAACG GCACGACGGC GCTCGTCGCC
GCGCTCCAGG TGCTCGACCT CGAGCCCGGC GACGAGGTGA TCACTAGCCC CTTCACGTTC
GTCGCCACCC TCAACGCGAT CCTCGAGGCC GGTGCCACGG CCCGGTTCGG CGACATCGCC
GTCGAGGACT TCAACCTCAC CGCCGACTCC GTGCGGGAGA ACCTCACGCC GCGCACGAAG
GTCCTCATGC CGGTGCACCT CTACGGGCAG ACGGCGGACA TGACGGCGCT CGGCGGGATC
GCCGCCGAGC GCGGCCTCGC CCTCGTCGAG GACGCCGCCC AGGCGCACGG GGCTCGCTTC
GAGGGCCGCG GCGCCGGGTC CTTCGGCACC GGGTGCTTCT CGTTCTACGC CACGAAGAAC
CTCACCACGG GCGAGGGCGG CATGATCACG ACGGGCGACG CCGACCTGGC CGACCGCCTG
CGCGTGCTGC GCAACCAGGG CATGCGCGCC CGGTACGAGT ACGAGATGGC CGGCCACAAC
TACCGGATGA CCGACCTGCA GGCCGCCGTC GCCCTGCCCC AGCTCGGCGG GTACGCGGGG
CAGCTGGACC GCCGGCGCGC GAACGCGGCC CGCCTCGCCG AGCTGCTCGG CGACGTCGAC
GGACTGGTGC TGCCGCAGCA GCTGCCCGGC CGCGAGCACG TCTGGCACCA GTTCACGGTG
CTGCTCCCGG CCGAGCACGC CGAGCGGCGC GAGCAGATCA TCGACGCGCT GCGCGACGAG
CACGGCGTCG GCAGCGGCAT CTACTACCCG CGCACCGTGT TCGACTACGA CTGCTACCGG
GACCGCGAGG ACGTCGTCGT CTCCGACACC CCGGTCGCCG ACGACGTGGT CCGGCGGTGC
CTGTCGCTCC CGGTCCACGC GTACCTCAGC GACGACGACG TCGTCACGGT CGCGACGGCG
CTGCGGGCGG TGCTCTCCTG A
 
Protein sequence
MIPISVVRLG AETESLVLDV IRSGIIAQGP KVAELESRFA ELVGAEHAVA VNNGTTALVA 
ALQVLDLEPG DEVITSPFTF VATLNAILEA GATARFGDIA VEDFNLTADS VRENLTPRTK
VLMPVHLYGQ TADMTALGGI AAERGLALVE DAAQAHGARF EGRGAGSFGT GCFSFYATKN
LTTGEGGMIT TGDADLADRL RVLRNQGMRA RYEYEMAGHN YRMTDLQAAV ALPQLGGYAG
QLDRRRANAA RLAELLGDVD GLVLPQQLPG REHVWHQFTV LLPAEHAERR EQIIDALRDE
HGVGSGIYYP RTVFDYDCYR DREDVVVSDT PVADDVVRRC LSLPVHAYLS DDDVVTVATA
LRAVLS