Gene Bcav_1178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1178 
Symbol 
ID7860637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1327788 
End bp1328831 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content72% 
IMG OID643865262 
Productglycosyl transferase family 2 
Protein accessionYP_002881200 
Protein GI229819674 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.313377 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.977932 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGCTG AGCAGTCCTC CAGCGCCGGC GGTCGCCCGG CGGCCGGGAC GCGCGAGACC 
CTGAGCCTCG TCGTCCCCGC GTTCAACGAG TACGAGGGCG CCGGGGAGAT CGTCGACTTC
TACCGCGACA TCGTCGCGGC GCACCCCGAT CTCGACGTCG AGCTCGTCGT CGTCGACGAC
GGCTCGAGCG ACGGGACCGC CGACGCCGTC CGCGGGGCGC TGGCCGACGG CGACCGCGCC
GTCGTCATCT CCCTCGCCCG CAACTTCGGG TCCCACGCGG CGATCACGGC CGGTCTGTCG
GAGTGCTCGG GCGACGTCGC TCTCACGCTG AGCGCGGACC GGCAGGAGCC GCTGTCCGCG
ATCGCCGACT TCATCGCGGC GTGGCGCGAC GGTGCCGACA TCGTGTGGGG GCTGCGGTCG
GTGCGGGCGA CGAAGTCGGG CCCGCAGGAG ACGTTCGCGA AGGCGTTCTC GCGGATCTTC
AACGCGACGT CGAGCGTGCC CACGTACCCG CCGTCGGGCC CGTCGCAGAT CCTCGTGAGC
CGTCGTGTCA TCGACGTCCT CACGACGATG CCGGAGACGA ACCGGAACGT GCTCGCGATG
GTCGCGTGGG TCGGCTTCGA CCAGCGCGAG ATCCACTTCG ACCAGCTCCC GCGGCCGCAC
GGCGTCAGCA AGTGGACGAC GTCGAAGAAG GCGAAGCTCG TCATCGACTC CTTCGTCGAG
TTCTCCTACG CGCCGATCCG CTGGCTGACC CTGCTCGGGC TCGGCGGGGG AGCGGCGGGG
GTGCTGCTCC TGCTCACCGC GCTCGTGCTG GCGTTCTTCC CGGGAGCGCC GTCCGGCACC
ACGCTGCTGG CCGGCCTGAT CCTCGCCGTC GGTGGAGCGC AGCTCGTCGG CATCGGCATC
CTCGGCGAGT ACCTGTGGCG CGCCGGTGAC GACGCCCGGA GGCGCCCCGT GTACGTGCTG
CGCGACCTCA CGCGGTCCGG CAGCGCCTCA CAGGACGGCG GCGTGGATGT TCCAGCCGCT
CGACCCGACG ACGCGCGGGG CTGA
 
Protein sequence
MRAEQSSSAG GRPAAGTRET LSLVVPAFNE YEGAGEIVDF YRDIVAAHPD LDVELVVVDD 
GSSDGTADAV RGALADGDRA VVISLARNFG SHAAITAGLS ECSGDVALTL SADRQEPLSA
IADFIAAWRD GADIVWGLRS VRATKSGPQE TFAKAFSRIF NATSSVPTYP PSGPSQILVS
RRVIDVLTTM PETNRNVLAM VAWVGFDQRE IHFDQLPRPH GVSKWTTSKK AKLVIDSFVE
FSYAPIRWLT LLGLGGGAAG VLLLLTALVL AFFPGAPSGT TLLAGLILAV GGAQLVGIGI
LGEYLWRAGD DARRRPVYVL RDLTRSGSAS QDGGVDVPAA RPDDARG