| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1159 |
|---|
| Symbol | |
|---|
| ID | 7860618 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 1301037 |
|---|
| End bp | 1301588 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 643865243 |
|---|
| Product | phosphoribosylaminoimidazole carboxylase, catalytic subunit |
|---|
| Protein accession | YP_002881181 |
|---|
| Protein GI | 229819655 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase |
|---|
| TIGRFAM ID | [TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.241039 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.961191 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGG CCACCGGAAG CTCCGCACGC CCCGTCGTCG GCATCGTCAT GGGATCCGAC
TCCGACTGGC CGACGATGGA GGCAGCCGCA GACGCCCTCG CCGAGCACGA CGTCCCGCAC
GAGGTCGACG TGGTCTCCGC GCACCGCACG CCCGCCGAGA TGCTCGAGTA CGGCCGCACG
GCCGCCGACC GCGGCCTCCG CGTCCTCATC GCGGGGGCCG GGGGAGCCGC GCACCTCCCC
GGCATGCTGG CGTCGGTGAC GCCGCTGCCG GTGGTCGGCG TGCCCGTCCC GCTCGCGCAC
CTCGACGGCA TGGACTCGCT GCTCTCGATC GTGCAGATGC CCTCCGGGGT CCCGGTCGCG
ACGGTGTCGA TCGGCGGTGC GCGGAACGCC GGACTGCTCG CGGTGCGCAT CCTCGCGGCG
GGGGCCGACG ACGACGCCGC CCGCCTCCGG GAGCGGATCG TCGCCTTCCA GGAGGGTCTC
GCCGAGACGG CCCGGGCGAA GGGCGCGCGC CTGCGCGCCG CGCGAGGGCA CACCACCGGA
TTCACGGCCT GA
|
|---|
| Protein sequence | MSEATGSSAR PVVGIVMGSD SDWPTMEAAA DALAEHDVPH EVDVVSAHRT PAEMLEYGRT
AADRGLRVLI AGAGGAAHLP GMLASVTPLP VVGVPVPLAH LDGMDSLLSI VQMPSGVPVA
TVSIGGARNA GLLAVRILAA GADDDAARLR ERIVAFQEGL AETARAKGAR LRAARGHTTG
FTA
|
|---|
| |