| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_1117 |
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| Symbol | |
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| ID | 7859971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 1255050 |
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| End bp | 1256582 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643865201 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_002881139 |
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| Protein GI | 229819613 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.348427 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAGAT TCCTGACACG CCGCGTTCTC GCGGGGCTGG CGATCCTGTT GGTCGCGAGC
TTCCTCTACT ACTTGATGAT CAACGCCGTC ATCGACCCGC TAGAGGACCT GCGCTTCAAC
ACCGATCCCG ACACCCCGCA GAAGATCGCG CAACGCATCA GCGACCTCCG GCTCGACGAG
TCGGTGTTCG TCCGTTACCT GTCCTGGCTC GGTAACTTCG TCACCGGCGA CATGGGGATC
TCCTGGCCGA CGGGGCAGAC GGTCACGAGC ATGCTCCAGG GCGCGATCAT CGCCACGATC
CAGCTGCTGA CGATGTCGAC GATCCTCGCG ATCTTCCTCG GCGTGGCAGT CGGCGTCGTG
AGCGCCCTGC GGCAGTACTC GTCGTTCGAC TACCTCATCA CGTTCGTCTC GTTCCTGCTG
TTCTCGCTCC CGTCGTTCTG GGTGGCGGTG CTGCTCAAGC AGTGGGGCGC CATCGGCTAC
AACGACTTCC TGCGTGACCC CGTGATCTCG ACGGCGGTCC TGATCGGCAT CGGCATCGTC
GCCGGCCTGG TCTGGACGCT CGCGATCGGC GGGGACGTCC GCAGGCGCGT GATCGTCTTC
GCCTCAGGCT TCGCCGCGAC CTTCGGCGTG TTCCTCTACC TCCAGCTCAG CGGCTGGTGG
CTGACGCCGA GGATCGACCT CGGCATGCTC GTCCTGATCG GCGCGGCGAC GGCGCTCGCG
GTCACGGCGA TCTCCACGGG TCTGCGCAAC CGCCGGTCCC TCGGAGCGGC GTTCACGTCC
GTGGGGGTCG GGCTCCTCTT CTTCGTGCTG CTCAACTACG GCGGAGGGTG GGGCGCGCTG
ACGCCGTCGA TGACCTGGGG GATGCTCATC CTCCTCGGCG TCGTCTCCGC GGCGATCGGC
GTCGGGGTCG GTTATGCCTG GGGCGGGCCG GACCGCGGTC AGTCCGCACG AACCGCGGCG
ATCGTGTCGG TCCTCATGGC GGTCTACATC GCCGTCGACC GCATGATGCA GGCCTGGCCG
GCCTACTCCG ACGCGCTCAG CGGGCGCCCG ATCGCCACGA CCGGCAACCG GACGCCGAAC
CTCGGCGGCA ACTTCTGGAT CACCGCGCTC GACACGTACA CGCACCTGAT CCTGCCGACG
CTCGTGCTGC TGCTCGTCTC GTTCGCGTCG TACACGCGCT ACTCGCGGGC CAGCATGCTC
GAGACGATGA ACCAGGACTA CATCCGCACG GCACGCGCGA AGGGCCTCAA CGAACGCACC
GTGATCATGC GGCACGCGTT CCGGAACACG CTCATTCCGC TGGCGACGAT CGTTCCCGTC
GACATCATCA CGCTGCTCGG CGGCGCGCTG ATCACGGAAC GCATCTTCGG CCGACCAGGA
ATGGGCTCGA TGTTCCTCAC CGGGTTGGAC ATGAACGACA TCAACCCCGT GATGGCCTAC
CTGATGATCG TGGCGGCGCT CGCGATCGTC GCGAACATCG TCGCCGACCT CGTCTACACA
GTCCTCGACC CCCGGATCCG GGTGAACGCA TGA
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| Protein sequence | MLRFLTRRVL AGLAILLVAS FLYYLMINAV IDPLEDLRFN TDPDTPQKIA QRISDLRLDE
SVFVRYLSWL GNFVTGDMGI SWPTGQTVTS MLQGAIIATI QLLTMSTILA IFLGVAVGVV
SALRQYSSFD YLITFVSFLL FSLPSFWVAV LLKQWGAIGY NDFLRDPVIS TAVLIGIGIV
AGLVWTLAIG GDVRRRVIVF ASGFAATFGV FLYLQLSGWW LTPRIDLGML VLIGAATALA
VTAISTGLRN RRSLGAAFTS VGVGLLFFVL LNYGGGWGAL TPSMTWGMLI LLGVVSAAIG
VGVGYAWGGP DRGQSARTAA IVSVLMAVYI AVDRMMQAWP AYSDALSGRP IATTGNRTPN
LGGNFWITAL DTYTHLILPT LVLLLVSFAS YTRYSRASML ETMNQDYIRT ARAKGLNERT
VIMRHAFRNT LIPLATIVPV DIITLLGGAL ITERIFGRPG MGSMFLTGLD MNDINPVMAY
LMIVAALAIV ANIVADLVYT VLDPRIRVNA
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