Gene Bcav_1086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1086 
Symbol 
ID7859940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1224366 
End bp1225775 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content76% 
IMG OID643865170 
Productpyridine nucleotide-disulphide oxidoreductase dimerisation region 
Protein accessionYP_002881108 
Protein GI229819582 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTAGCC TGGCGCGCGT GGACACGTAC GACGTCGTCG TCATCGGGGC GGGCCCGGCC 
GGCACCGCCG CCGCGCTGCG CGCCGCGGAG CTCGGCGCTC GGGTCGCGGT GCTGGAGGCG
GACCGGGTCG GTGGCACGTG CGTCAACAGC GGGTGCGTGC CGACGCGCGT GCTCGCGAAG
ACCGCGCGCC TCGTCCGCGA GGTGCGCACC GCCGACCGGT ACGGGATCGG CGCCGGGCCG
GGGCTCGTGG ACTGGCCGAC GACGGTCGCC CGCGTGCACG CCACGGTGGA CCGCGTGCGC
GGGCTCAAGC GGGAGGCCGA GCGGTTCGCT GAGGCCGGGG TGACGCTGGT GCTGGAGGGG
CGCGCGCGCT TCGTCGACGA CGTCACGCTC GAGCTGGCGA GCGGGCGGCG CGTGCGGGGC
TCCTCGATCG TCGTCTGCGT CGGGGGCCGC TCACGGCGCC TGCCGATCCC GGGCGCCGAG
CTGGCGACCG TGCCGGAGGA CGTGCTCGCC CTGCCCGCGC TCCCGCGGCG CGTCGCGATC
GTCGGCGCGG GCAGCACCGG CGCCCAGCTG ACCACGATCT TCTCGGCGTT CGGCAGCGAG
GTGACGCTGC TCGACGTCGC GCCGCGCATC CTGGCCACGA CGGACGACGA CGTCTCGCGC
GCCGTCGCCG ACGCGTTCCG GTCGCAGGGG GTCGACGTCC GCACCGGGCT CGACGGCGTC
ACGGCACTCG AGCGGGAGGC GGACGGGACG ATCCGGCTCA CATCCGTCGA GGACGGTGCG
CCGTCGCGGG ACCGGTTCGA CGCCGTCGTC ATGGCGACGG GCTGGCCGGC CGACGTCGCG
GACCTCGGCC TGGAGAATGC GGGTCTGTCC CTGACGAACG GGGCGATCGC CGTCGATCGC
TACTTCCGCA GCGCCGTCGG GCACATCTTC GCCGCGGGCG ACGCGAACGG CCGCGACCTG
CTCGTGCAGG CGGCCCACTT CGAGGCGGAG GCCGCCGCCG AGAACGCCGT GCTCGGCGTC
AACCGGCGCA CGCCCGGCCA CCTCCTCCCC TCGGGCGGGT TCACGGACCC GGACTACGCG
GGGGTGGGCA TGACGGAGGC CGAAGCGCGC CGGCGGGACC CGTTGTGCCT CGTGGCCACC
GTGCCGCTCG CCGAGCTCGA CCGCGCGGTG ATCGACGACC GTGAGACGGG CTTCCTCAAG
CTCGTCGCAG ACCGGCGACG CGAGGTCATC CTCGGTGCGC ACGCGGTCGG GGAGAACGCC
GTCGAGATCG TGCAGTCGGT GACGACGGCG ATGGCCGCCG GCGTCGATCT CGCGACGCTG
GCCGATGTGC GGTTCGCGTA CCCGACCTAC GGGGCCATCG TCGGCCTCGC CGCCCGCGCA
CTCCTGGCCG AGCCACCGGC CGCGGCGTAG
 
Protein sequence
MRSLARVDTY DVVVIGAGPA GTAAALRAAE LGARVAVLEA DRVGGTCVNS GCVPTRVLAK 
TARLVREVRT ADRYGIGAGP GLVDWPTTVA RVHATVDRVR GLKREAERFA EAGVTLVLEG
RARFVDDVTL ELASGRRVRG SSIVVCVGGR SRRLPIPGAE LATVPEDVLA LPALPRRVAI
VGAGSTGAQL TTIFSAFGSE VTLLDVAPRI LATTDDDVSR AVADAFRSQG VDVRTGLDGV
TALEREADGT IRLTSVEDGA PSRDRFDAVV MATGWPADVA DLGLENAGLS LTNGAIAVDR
YFRSAVGHIF AAGDANGRDL LVQAAHFEAE AAAENAVLGV NRRTPGHLLP SGGFTDPDYA
GVGMTEAEAR RRDPLCLVAT VPLAELDRAV IDDRETGFLK LVADRRREVI LGAHAVGENA
VEIVQSVTTA MAAGVDLATL ADVRFAYPTY GAIVGLAARA LLAEPPAAA