Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_1039 |
Symbol | |
ID | 7859813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 1179530 |
End bp | 1180462 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | 643865124 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_002881062 |
Protein GI | 229819536 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.258885 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGGATCC TGGTGTTCGG CGGCAGCGGC GCGATCGGCC GGCAGCTGCT CCCCCGGCTC GTCGCCGCCG GGCACAGCGT GACGGGCGCG ACGCGGTCCG AGCGGACGGC GCAGGCGTGG CGCGAGACCG GACTCGGCGC CGTCGTCGCC GACGCTCGTC GGGCGGACGA CGTCGAAGCG GCCGTCGCGG AAGCCGCGCC GGACGCGATC GTGCACCAGC TCACGGACCT GGGCGCGCGG GACTACACCG CGAACGCGCG CCTGCGGACC CTCGCCACCC GCGCGATCGT CGACGCCGCG GCGGCCCACG GAGTCGAGCG GGTCGTGGCG CAGAGCGTCG CCTGGACGTA CCTGCCCGGG CCCGGGCGGG CCGGCGAGGA CGAACCGGTG TCGACGGACT CCTCAGGTGT CGGCGCCCTC GAGACCGCGG TGGCCGAGGT CCCGCTCGGC GTCGTGCTGC GGTACGGGCT GGTGTACGGG CCGGGCACCT GGTTCGACGT CGACGGCGCG GCCGTCGAGG ACGCCCGCGG CGGCCGGCTC GCCGACCGTC GCTCCGCGAT CACGAGCTTC GTCCACGTCG CCGACGCCGC ACGCGCCGCC GCAGCCGCTC TCGACTGGCC GGCCGGCGTC GTCAACGTCG TCGACGACGA TCCCGCGCCG CTCGGCGAGT GGATGGGCGG CGTTCGCCTC CGCCGTCGGC CTCCCGCCGC CACCGGCGCC CGACGACGTC CCGCCGGGCC GCGCGGTGAG CAACGCCCGC CTCCGCGAGC TCGGGTTCCG CCTCGACCAC CCCACCTGGC GGGACGGGTT CGCCGCGCTC GGGGCCAGGG CAGCGAGCCA CGTCGGCTGA GGCCCGGCCA CGCCACTGGC TCCGTCACGG ACCCGGAGCA CCGGTGGCGG ACCGCCCGCC CTGTGCCGCG ACCGCGCGGA TGA
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Protein sequence | MRILVFGGSG AIGRQLLPRL VAAGHSVTGA TRSERTAQAW RETGLGAVVA DARRADDVEA AVAEAAPDAI VHQLTDLGAR DYTANARLRT LATRAIVDAA AAHGVERVVA QSVAWTYLPG PGRAGEDEPV STDSSGVGAL ETAVAEVPLG VVLRYGLVYG PGTWFDVDGA AVEDARGGRL ADRRSAITSF VHVADAARAA AAALDWPAGV VNVVDDDPAP LGEWMGGVRL RRRPPAATGA RRRPAGPRGE QRPPPRARVP PRPPHLAGRV RRARGQGSEP RRLRPGHATG SVTDPEHRWR TARPVPRPRG
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