Gene Bcav_1036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1036 
Symbol 
ID7859810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1177474 
End bp1178535 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content74% 
IMG OID643865121 
ProductDNA polymerase IV 
Protein accessionYP_002881059 
Protein GI229819533 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.165009 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGCCA CCGACGGCGA GATCGAGCGC ACGGCCTGGG TGCTCCACCT CGACCTCGAC 
CAGTTCATCG CCGCGGTGGA GGTGCTGCGC CGGCCCGAGC TCGCCGGGAA GCCGGTCGTC
GTCGGCGGGT CGGGAGACCC GACACAGCGG CGGCAGGTCG TCGCGACGGC GTCCTACGAG
GCGCGAGAGT TCGGCGTGCA CTCCGGCATG CCGCTCACCG TGGCGCACCG GCGTTGCCCC
GATGCCGTGT TCCTGCCGTC CGACCACGCC GCGTACGACG AGGCGTCGCT GCACGTCTGG
GCGACCGTGC GCACGTTCCC GGTCCTCGTG GAGGAGCTCG GCTGGGACGA GGGGTTCATC
GGTGCACGAA CTGCCGACCC GGAGGCTCTG GCTCGCGCGG TCCAGGCGGC GGTGCTCGAG
GCGACCGGAC TGCACTGCTC GATCGGGGTC GGGGACAGCC GCCTGCGCGC GAAGACGGCC
ACGGGCTTCG CGAAGCCGCG CGGCGTGCAC CGGCTGACTG CCGAGACGTG GATGCCGGTG
ATGGGTCAGC GGCCGACGCG CGACCTGTGG GGCGTGGGCC CGCGCATCTC GGAGCGACTC
GCGGGGCTCG GGATCCGTAC GGTCGCGGAT CTCGCGGCGG CCGACGAAGC CGCTCTCGTC
GCCGAGTTCG GGCCCACGAA CGGGCCGTAC GTGCTCGACC TCGGCCGCGG CGGCAGCGAC
GCCCGCGTCG CGAGCGGGCC GCCGCCGCGG ATGGGGCGCA GCCGGGAGGT GACGTTCCCG
ATCGACCTGA CGGACGCCGT CGACGTCCTC GGGCACGTGC TCGAGATGGC GCGGGAACTG
ACGACGGCGA CGCTCGCCGA CTCGCGTCTC GTCGCCAGGG TCGCGGTGAA GGTGCGCGAG
GCGCCGTTCT TCACGTCGAC CAAGATCGCG AAGGTCCTCC CGGGGCCGAC GGCGGAGGTG
GCGGTCGTGG AGGAGACGGC GGCCCGGGTG CTCGAACGCT TCGGCGAGCT GCGGCCGGTG
CGGCTGCTCG GCGTCCGCGT GGAGTACGAC CGGCCCGCCT GA
 
Protein sequence
MDATDGEIER TAWVLHLDLD QFIAAVEVLR RPELAGKPVV VGGSGDPTQR RQVVATASYE 
AREFGVHSGM PLTVAHRRCP DAVFLPSDHA AYDEASLHVW ATVRTFPVLV EELGWDEGFI
GARTADPEAL ARAVQAAVLE ATGLHCSIGV GDSRLRAKTA TGFAKPRGVH RLTAETWMPV
MGQRPTRDLW GVGPRISERL AGLGIRTVAD LAAADEAALV AEFGPTNGPY VLDLGRGGSD
ARVASGPPPR MGRSREVTFP IDLTDAVDVL GHVLEMAREL TTATLADSRL VARVAVKVRE
APFFTSTKIA KVLPGPTAEV AVVEETAARV LERFGELRPV RLLGVRVEYD RPA