Gene Bcav_1023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1023 
Symbol 
ID7859796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1167464 
End bp1168288 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content77% 
IMG OID643865107 
Producthypothetical protein 
Protein accessionYP_002881046 
Protein GI229819520 
COG category[R] General function prediction only 
COG ID[COG2945] Predicted hydrolase of the alpha/beta superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.995394 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0462853 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGG CGGTCGCGGT GGTGGTCGGC GTCCTCGCCC TGGCGATCGG CGCGGCCTGG 
GTCTTCCAGC GGTCGCTCGT CTTCCTGCCC GACCGGACGA CGCCGCCGCC GGCGTCGTCC
GACGTCGTCG ACGGCGCTCG TGACGTCCTC CTGCACACGT CCGACGGGCT CGAGCTCACC
GCGTGGGAGG TGCCGGCCGA CCCGGCCTGC GGGGTCACGG CGCTCGTGCT GCCCGGCAAC
GGCGGGAACC GGGCCGACCG CGCCGGCCTC GTGCGCGCGC TCGCAGAGCG CGGGATGGGC
GTGCTGCTCG TGGAGTACCG CGGCTACGGC GGCAACCCCG GCTCGCCGTC CGAGTCCGGG
CTGCGGCGCG ACGCGCGGGC CGCGCTCGCC CACCTGCGCG ACGGCACCAC CGGCAGCCTC
CTGTACGTCG GCGAGAGTCT CGGCGCCGCC GTCGCCACCG ATCTCGCGGC CGGCGAGCCC
CCCGACGGTC TGCTGCTGCG CTCCCCGTTC ACGTCGCTCG CCGACGCCGG GAGGGCGGCC
TACGGCGTGC CCGTCGGCTG GCTGCTGCGC GACCGGTTCG ACGTGCGGGG CGCCGTCGTC
CGCGTCGACG CACCGCTGGC GGTCGTCTAC GGCGACGCCG ACCACATCGT GCCGCCGGCC
CAGTCACGGG AGGTGGCCGA CGTCGCGGGC TCGGCCGGGC TCGACGTCAC CGTGAGCGTG
GTGCCGGGCG CCGACCACAA CGACGCCGAC CTCGCGCAGG GGCAGGCTCT GATCGAGGCG
GCGCTCGGAC TCGCGCGCTC GGCGGGAGCC GCGGACTGCG GCTGA
 
Protein sequence
MTTAVAVVVG VLALAIGAAW VFQRSLVFLP DRTTPPPASS DVVDGARDVL LHTSDGLELT 
AWEVPADPAC GVTALVLPGN GGNRADRAGL VRALAERGMG VLLVEYRGYG GNPGSPSESG
LRRDARAALA HLRDGTTGSL LYVGESLGAA VATDLAAGEP PDGLLLRSPF TSLADAGRAA
YGVPVGWLLR DRFDVRGAVV RVDAPLAVVY GDADHIVPPA QSREVADVAG SAGLDVTVSV
VPGADHNDAD LAQGQALIEA ALGLARSAGA ADCG