Gene Bcav_1016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1016 
Symbol 
ID7859789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1160749 
End bp1161396 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content77% 
IMG OID643865100 
ProductPhosphoglycerate mutase 
Protein accessionYP_002881039 
Protein GI229819513 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0419238 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGGAG CCCGGGAACC GCAGCTCGTC CTCGTCCGGC ACGGGGAGAC GGAGTGGAGC 
GCCGCCGGGA AGCACACCGG GCGCACCGAC CTCCCGCTGA CACCGGCGGG CGAGGGGCAC
GCGCGTCTCG CCGCGCGCGC GATCGCGGGT CGCACCTTCG GACTCGTCCT CGCGAGCCCG
CTGCAGCGGT CCCGCCGCAC GGCCGAGCTG CTCGGCTTCC CGGACGCCGT CGTCGACGAG
GACGTGGCGG AGTGGGACTA CGGACCGGCC GAGGGGCGCA CGTCCGCGGA GATCTCCGCC
GAGCTGGGCC GGCGCTGGAC GGTGTTCGGT GACGGCGTCG GCTCGCTGCC GGTGCCCGCC
GACGGGCCGG GGGCGCACGC CGGACCGGGG GAGACTCTCG ACGACGTCGC GCGGCGAGCG
GCCGCCGTCG TCGCCCGCGT GGAGCCGGTG CTGGACGCCG GCCAGGACGT GCTGGTCGTC
GGGCACGGCC ACCTCCTGCG GGTGCTCGCG GCGGTCTGGG TCGAGGCCGA TCCGGCGTTC
GGGTCTCGGC TCGAGCTCGC CACGGCGGCC GTGTGCCTCC TCGGGTACGG GCACGAGCTG
CGCACGATCG AGGGGTGGAA CGTCGGCGCC CCGGAGGGCG CGCGGTGA
 
Protein sequence
MSGAREPQLV LVRHGETEWS AAGKHTGRTD LPLTPAGEGH ARLAARAIAG RTFGLVLASP 
LQRSRRTAEL LGFPDAVVDE DVAEWDYGPA EGRTSAEISA ELGRRWTVFG DGVGSLPVPA
DGPGAHAGPG ETLDDVARRA AAVVARVEPV LDAGQDVLVV GHGHLLRVLA AVWVEADPAF
GSRLELATAA VCLLGYGHEL RTIEGWNVGA PEGAR