Gene Bcav_1005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1005 
Symbol 
ID7859778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1143529 
End bp1144500 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content77% 
IMG OID643865089 
Productglycosyl transferase family 2 
Protein accessionYP_002881028 
Protein GI229819502 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0150967 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGAGC TCGACGTGCG CGACACTCGC GCGAGCGTGG CGATCGCGAT CCTCACGTTC 
CGTCGACCCG ACGCGCTGGC CCCTCTGGTC GAGGCGGTGC GGGCGCAGAC CTCCGGGCTG
AGGCACCCGG CCCGGGTCGT CGTCGTCGAC AACGACCCGG GTGCCTCCGC CCGCGCCGTC
GTCGCCCGCC TAGGCGGGCC GGACCTGACC TACGTCCACG AGCCCCGGCC CGGCATCGCC
GCGGCGCGCA ACGCCGCGCT CGACGCGGCC GCCGCCGACC GGGTCCTCGT GTTCATCGAC
GACGACGAGC TGCCCGAGCC GCGCTGGCTG GCGCGGCTGC TCGAGGCGTG GCGGGACTGG
CCGTGCGACG CGGTGAGCGC GCCGACGGTC AAGGTGCTCC CCGACGACGC CGAGGGCTGG
GTGGTGGCGT CGCGGTTCTT CGCGCGGGCC CACCGGGCGA CGGGCGTGCG GGTGGAGGGC
GCGGCGGCGG GCAACCTGCT GCTTGACCTC GACGCCGTGC GCTCCCGCGG CGTGCGCTTC
GACGAGCGGT TCGGGCTCAC CGGCGGCGAG GACAGCCTCT TCTCGCGGCA GCTCACCGCG
CGCGGCGGGG TCATCCGATG GCGCGACGAC GCCGTGACCA GCGAGCCGGT GGTGCCCGAG
CGCGCCACGC GCTCGTGGGT GCTGCGCCGG GAGCGGCGGA CGGGCAGCAC GTGGAGCCGG
GTGCACCTCG TGCTCGCCGC CGGGGCCGGG GCGCGTGTGC GAGTCGGCGC GCGCCTGGCC
ATGACGGCGG CAGTCCTGGT GGTGCGGGGT GTGGCCCGCG TGCTGCTCGG CGCTCTCACG
CGGGACCTCG GCAGGCGCGC TCACGGGCAG CGCGAGCTCG CGCGTGCCGC GGGTGTGCTG
ACCGGGCTGG TCGGCGGGCA CGTCGAGGAG TACGCGCGGG CCGAGCCGGT CGCGCTCGCG
GTCAGGGCCT GA
 
Protein sequence
MGELDVRDTR ASVAIAILTF RRPDALAPLV EAVRAQTSGL RHPARVVVVD NDPGASARAV 
VARLGGPDLT YVHEPRPGIA AARNAALDAA AADRVLVFID DDELPEPRWL ARLLEAWRDW
PCDAVSAPTV KVLPDDAEGW VVASRFFARA HRATGVRVEG AAAGNLLLDL DAVRSRGVRF
DERFGLTGGE DSLFSRQLTA RGGVIRWRDD AVTSEPVVPE RATRSWVLRR ERRTGSTWSR
VHLVLAAGAG ARVRVGARLA MTAAVLVVRG VARVLLGALT RDLGRRAHGQ RELARAAGVL
TGLVGGHVEE YARAEPVALA VRA