Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_0971 |
Symbol | |
ID | 7858192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 1102968 |
End bp | 1104812 |
Gene Length | 1845 bp |
Protein Length | 614 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643865054 |
Product | methionyl-tRNA synthetase |
Protein accession | YP_002880994 |
Protein GI | 229819468 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0143] Methionyl-tRNA synthetase |
TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0325311 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCCACA TCCTCTCCGC TGTCGCCTGG CCGTACACGA ACGGCCCGCG GCACATCGGT CACGTCGCCG GGTTCGGCGT TCCCTCCGAC GTCTTCAGCC GGTACATGCG GATGGCGGGC CACGACGTGC TCATGGTGTC GGGCACCGAC GAGCACGGGA CGCCGATCCT CGTGCTCGCC GAGCAGGAGG GGGTGACGCC GCAGGAGCTC ACGGACCGTT ACAACCGGGT CATCGTCGAC GACCTCGCGA ACCTGGGCCT GTCCTACGAC CTGTTCACCC GGACGACGAC GCGCAACCAC TACGCCGTCG TGCAGGAGAT GTTCCGCACG GTCCACAAGA ACGGCTACAT GGTCGAGCAG ACCACGATGG GCGCCATCTC GCCGTCGACC GGGCGCACGC TCCCGGACCG GTACATCGAG GGCACGTGTC CGATCTGCGG CTACGACGGC GCTCGCGGCG ACCAGTGCGA CAACTGCGGC AACCAGCTCG ACGCCGTCGA CCTCATCAAC CCACGGAGCC GGATCAACGG CGAGAAGCCG ACGTTCATCG AGACGCAGCA CTTCTTCCTC GACCTGCCCG CCCTCGCTGA CGCGCTCGGT GCGTGGTTGC GCACCCGCAC GCACTGGCGC CCGAACGTCC TCAACTTCTC GCTGAACCTC CTCGACGACC TCCGTCCCCG GGCCATGACC CGCGACATCG ACTGGGGCAT CCCGGTCCCG CTCCCGGGCT GGGAGGACAA CCCCGCCAAG CGGCTGTACG TGTGGTTCGA CGCCGTCATC GGCTACCTCT CGGCGAGCAT CGAGTGGGCG CGCCGCCAGG AGCTCGCCGC CGGCGGCGCT GGCACGCCGG ACGCCGAGGC GTGGCGTGCG TGGTGGAACC CAACGCCCGG GCTCGACCAG CAGTCGTACT ACTTCATGGG CAAGGACAAC ATCACGTTCC ACTCGCAGAT CTGGCCGGCG GAGCTCCTCG GCTACGCGGG GAAGGGCAGC CGCGGCGGCG AGCCCGGCAT CTACGGGGAG CTGAACCTCC CGACCGAGGT GGTCTCCAGC GAGTTCCTGA CGACGGAGGG CAAGCAGTTC TCGACGTCGC GCGGCGTCGT CGTCTACGTG CGGGACATGC TCGCCCGCTA CCAGCCCGAC GCCCTGCGCT ACTTCATCGC CGTCGCCGGC CCGGAGAGCT CCGACTCCGA CTTCACCTGG TCGGAGTTCA AGCGACGCAC GAACGACGAG CTCGTCGCCG GCTGGGGCAA CCTCGTCAAC CGGACCGCGA CGATGGTCCA CAAGAACTTC GGTGCCGTCC CCGAGCCGGG GGAGCGCCTC GCCGTCGACG AGGCGGTGCT GGCGACGACG CGCGCCGGCT TCGCGCAGGT CGGCCGGCTC CTCGAGACGC AACGGCAGCG GGCCGCCGTC ACCGAGGCGA TGCGGGTCGT CGGCGAGGTC AACAAGTACG TCTCGGAGAC CGAGCCGTGG AAGCTGAAGA CCGACCGCGA CCGGCTCGCC ACCGTGCTGC ACACCGCCAC GCAGGCCGTG GCGGACTGCA ACGTGCTCCT CGCCCCGTTC CTGCCGCACG CCGCGCAGGA GATCCACTCC GCGCTCGGCG GCACGGGAAC GCTCGCGCCG CAGCCGCGCG TGGACGAGGT GACGGATCTC GACGACGCGA GCCGCAGCTA CCCGATCATC ACGGGGGACT ACGTGCGGGG CGAGACGCTC GCTCCCTGGG AGAGCGCCGC CGTCGTGGCC GGGACCCCGA TCGAGAAGCC TTCGCCGGTC TTCACGAAGC TCGACGACGC GATCGTCGAG GAGGAGCTCG AGCGGATGCG CGCCGGCGCC GCCGAGCGGG CGTGA
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Protein sequence | MSHILSAVAW PYTNGPRHIG HVAGFGVPSD VFSRYMRMAG HDVLMVSGTD EHGTPILVLA EQEGVTPQEL TDRYNRVIVD DLANLGLSYD LFTRTTTRNH YAVVQEMFRT VHKNGYMVEQ TTMGAISPST GRTLPDRYIE GTCPICGYDG ARGDQCDNCG NQLDAVDLIN PRSRINGEKP TFIETQHFFL DLPALADALG AWLRTRTHWR PNVLNFSLNL LDDLRPRAMT RDIDWGIPVP LPGWEDNPAK RLYVWFDAVI GYLSASIEWA RRQELAAGGA GTPDAEAWRA WWNPTPGLDQ QSYYFMGKDN ITFHSQIWPA ELLGYAGKGS RGGEPGIYGE LNLPTEVVSS EFLTTEGKQF STSRGVVVYV RDMLARYQPD ALRYFIAVAG PESSDSDFTW SEFKRRTNDE LVAGWGNLVN RTATMVHKNF GAVPEPGERL AVDEAVLATT RAGFAQVGRL LETQRQRAAV TEAMRVVGEV NKYVSETEPW KLKTDRDRLA TVLHTATQAV ADCNVLLAPF LPHAAQEIHS ALGGTGTLAP QPRVDEVTDL DDASRSYPII TGDYVRGETL APWESAAVVA GTPIEKPSPV FTKLDDAIVE EELERMRAGA AERA
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