Gene Bcav_0946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0946 
Symbol 
ID7858167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1064298 
End bp1065545 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content77% 
IMG OID643865029 
Producttransposase IS3/IS911 family protein 
Protein accessionYP_002880969 
Protein GI229819443 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.365915 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGGAC AGCGGTACCC GGCCGAGCTC AGGACGGCTG TGGTCGAGCA GGCGCTGACG 
ACCGGGCAGG CGGCGAGCGT CGTCGCCCGC GAACGCGGGA TCTCCCCGAA CACGCTGCGG
CGCTGGATCC GGGAGCACCA GGAGCAGGAG CGAGCGGGCG AGCGGGAGCC GGGGCCGCAG
GACGCCGCGC CGGCGCAGGT CACCTCGTCG CCGGCGCCCG TGCCGGCTGA GGCGGAACCC
GTGGTGGCCG AGCCGGAGGC TGCGGTGGCG GAGCCCACGG TGGTCGAGGC GGGGCCCGTG
GTCGCGGAGC CAACCCCGGC GGTGCCAGAC CCGACGCCGG CACCGGTGCC GTGGCAGCCG
GAGCGTGCCA TGGCGGTGCG GAGGCGGCTC GCCGCGATGG CCCTGCGCGA GCCGGGCCCC
ACCCCGCTCG TGCGGGAGCC GGTTCAGGTC CCCGTGGTGG CGGAGCCGGA GCGCGCACCG
GTCGTGCTCG AAGCCGAACC GGAGCCGGAA CGAGTGCCGG ACCCGATCGT CCCGGAGCCG
GAACCGGCGC CGGACCCGAT CGTCCCGGAC CCGATCGTCC CGGAGCCGGA GCCGGAGCTG
AACCCTGGCC CGGGCCCGGC CGCCGTCGTC CAGGACCAGC CGGCGCCGGG ACCGACCCCG
GCGGATCCCG CGCCCGCTTC ACCGCCCGCG TCCCCGCCCG CCGTCCGTGC ACCCGTCCGC
GCGGTCCTGC CGGGGTGGGC CCGCGCGTGG ATGGGCGCCG TCGTCGTCGC GTGGGTCGTG
AGCCTGGTCG TCGCAGCGAC GGTCACGGCC TCCTCCTCGC TCTGGAACGC GGCGTTCGTC
GCCCACGCGC TGTTCCTCGT GGTCGGCCTG GGCGCCGTCG TCGCCCTCGA CTGGCACGGT
CTGCTCTGGC TCGTCGGACG GCGCGACCTG GGCGAGACGC TCCGGCTCGC CGACGCGGTC
ACGCCACTCA TCTGGATCGG CGTCGGCGGC CTGATGGTCA GCGGTTCGCT CCTCGGGCCG
GATCTCTCCA GTCCGATGAC GTGGGCGAAG CTCGTGCTCG TGCTGGTCGT CGCTCTCAAC
GGGGTCCTGA CGCCTGCGAC GGCGGCCCAG CTGCGAGCGC TGCCCCCGTC GGTCCGGCCG
CTCCGGGTGC CGCGGCGCGT GTTCGGGCGC CTCGTGCTGG CCACGGGCGT GTCGCAGGCC
GGATGGCTCG GTGCGGCGGC GATCGGGTTC GCCAACGCAC TGACCTGA
 
Protein sequence
MGGQRYPAEL RTAVVEQALT TGQAASVVAR ERGISPNTLR RWIREHQEQE RAGEREPGPQ 
DAAPAQVTSS PAPVPAEAEP VVAEPEAAVA EPTVVEAGPV VAEPTPAVPD PTPAPVPWQP
ERAMAVRRRL AAMALREPGP TPLVREPVQV PVVAEPERAP VVLEAEPEPE RVPDPIVPEP
EPAPDPIVPD PIVPEPEPEL NPGPGPAAVV QDQPAPGPTP ADPAPASPPA SPPAVRAPVR
AVLPGWARAW MGAVVVAWVV SLVVAATVTA SSSLWNAAFV AHALFLVVGL GAVVALDWHG
LLWLVGRRDL GETLRLADAV TPLIWIGVGG LMVSGSLLGP DLSSPMTWAK LVLVLVVALN
GVLTPATAAQ LRALPPSVRP LRVPRRVFGR LVLATGVSQA GWLGAAAIGF ANALT