Gene Bcav_0918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0918 
Symbol 
ID7858139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1030121 
End bp1031170 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content70% 
IMG OID643865001 
Producttranscriptional regulator, LacI family 
Protein accessionYP_002880941 
Protein GI229819415 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGGA CGAGGCCCAA GCGGCGGGAC GTGACTCTGC AGGACGTCGC CGGTGCCGCT 
GGGGTGTCCT CCGCATCCGT GTCTCGGGTG CTGCGCGGCA GTGGCTACGT CTCGCCGGAG
GTCGAGGCCC GCGTCCTGCG GGCCGTGGCC GACACCGGCT ATCGGCCGCC GAAGAGCCCC
GATCACACCG ACTCGGACCT GATCGCCGTC GTGGTGAACG ATCTCGGCAG CGGCCTGCTG
GTGGATGTCA TCCGTGGCGC AGAGCGGACC GCGACCGCGT CCGAGCTCCT CACGGTCGTC
TGCACGACGT CGTACTCCGC AGAGCGCGAG ATCGAGATTC TCTCCATGCT CGCGAACCGC
CAGGACATCG GGGCCGTGAT CGTGGTCGGA GGAGTCCGCC CCACCGCCGA GTACGCCCGC
CGCATGGTGG ACGTCGAGAG ACTTCTGACG AACCGTGGAG GTGTCCTGGT CTTCGCCGGA
CGCCCGCCGA TCGACGAGTC GGTACCACAG CTCGTCGTCG AGTACGAGAA CGAGGGCGGC
GCGTACTCCG CGACGAGTCA CCTCATCTCG CGCGGTCACC GGCGTATCGC ACTGCTCCCC
GGCATGCCCG GGATGACGAC GGGCGAACAG CGTCTCTCGG GATACCGGAA GGCGATGGCC
GCGGCGGGCG TCGAGATCGA CGAGCAGCTG ATCGTCTGGA GCGCCGGTCA GGATCGCGCG
GGGGGCAATG GCGCGGTCCG CGAGCTGCTC GCGCGCGGTC ACGACTTCAC CGCCGTCTTC
GCGGGCAACG ACGAGATGGC GGCCGGCGCG CTGACGGTCC TTCGGGGTGC GGGCCTGCGG
GTTCCCGACG ACGTGTCGCT CGTCGGTTAC GACGACAGCC CGTTGGCGGT CGCACTGAGC
CCGTCGCTGA CGAGTGTGCA CCTCCCGCAC GAGGAGCTCG GAACCGAGGC CGTGCGTCTG
GCGACGCGAC GCCCAGGGCG TGGCTCGGGG TTCGAGCGCG TCGTGCTCGG CACGCACCTG
GTCGTCCGGG ACTCGGTCGC CCAGCTCTGA
 
Protein sequence
MARTRPKRRD VTLQDVAGAA GVSSASVSRV LRGSGYVSPE VEARVLRAVA DTGYRPPKSP 
DHTDSDLIAV VVNDLGSGLL VDVIRGAERT ATASELLTVV CTTSYSAERE IEILSMLANR
QDIGAVIVVG GVRPTAEYAR RMVDVERLLT NRGGVLVFAG RPPIDESVPQ LVVEYENEGG
AYSATSHLIS RGHRRIALLP GMPGMTTGEQ RLSGYRKAMA AAGVEIDEQL IVWSAGQDRA
GGNGAVRELL ARGHDFTAVF AGNDEMAAGA LTVLRGAGLR VPDDVSLVGY DDSPLAVALS
PSLTSVHLPH EELGTEAVRL ATRRPGRGSG FERVVLGTHL VVRDSVAQL