Gene Bcav_0702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0702 
Symbol 
ID7861800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp778157 
End bp780211 
Gene Length2055 bp 
Protein Length684 aa 
Translation table11 
GC content71% 
IMG OID643864782 
ProductATP-dependent metalloprotease FtsH 
Protein accessionYP_002880725 
Protein GI229819199 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0465] ATP-dependent Zn proteases 
TIGRFAM ID[TIGR01241] ATP-dependent metalloprotease FtsH 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.447508 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCA AGAAGCTGAC GCGCGGTCCT CTGCTGTGGA TCGTCCTGCC CATCCTCGTG 
CTGCTGTTCG CGCTGAACCT GCTCCGGGGG TCCGGAGTCC AGACGATCGA CACGTCGCAG
GGCCTCGAGC TCCTGCGCGG CGACACCGTC GAGCAGGCCC AGATCACCGA CGGCTACCAG
CGCGTCAACC TGACCCTGAC CGAGAACTTC GTGCCGGCGG AGGGCGAGGA CAAGGGCACC
TCCGTCCAGT TCTACTACGC CACGCCGCAG GCCGACGAGG TCGCCGAGCT CATCCGCGAC
GCCGACCCCG AGGGCGGGTA CAACTCCGTC GTGCCGTCGA CCCCGTGGTG GTCGACGCTC
CTCATGACGA TGCTCACGCT CGTCCTGATC GTCGCCGTCT TCTGGTTCTT CCTGTCCCGG
ATGCAGGGCG GGAACTCCCG GATGATGAAC TTCGGGAAGT CCAAGGCGCG GCAGGTGAAC
GTCGAGAACC CCGAGGTGAC GTTCGCCGAC GTCGCGGGCG TCGACGAGGC GGTCGAGGAG
CTCGTCGAGA TCAAGGAGTT CCTCTCGGAG CCGGCGAAGT TCCAGGCGGT GGGCGCGAAG
ATCCCGAAGG GCGTCCTGCT GTACGGCCCG CCCGGCACCG GCAAGACGCT CATCGCCCGC
GCCGTCGCGG GTGAGGCCGG CGTCCCCTTC TACTCGATCT CCGGCTCGGA CTTCGTCGAG
ATGTTCGTCG GCGTCGGCGC CTCCCGGGTG CGCGACCTGT TCGAGCAGGC GAAGACGAAC
TCGCCGGCCA TCATCTTCGT CGACGAGATC GACGCCGTCG GCCGGCACCG CGGCGCGGGC
CTCGGCGGTG GGCACGACGA GCGCGAGCAG ACGCTCAACC AGCTCCTCGT CGAGATGGAC
GGCTTCGAGG CGCACACGAA CGTCATCCTC ATCGCCGCCA CGAACCGGCC CGACATCCTC
GACCCGGCGC TGCTGCGCCC CGGCCGGTTC GACCGGCAGA TCGCCGTCGA GGCGCCCGAC
CTGCAGGGCC GGCTCGCGAT CCTGCGGGTG CACGCCAAGG GCAAGCCGAT GACCGGCGAC
GTCGACCTCG AGGTCGTCGC CCGCCGCACG CCGGGCTTCT CCGGTGCCGA CCTGGCGAAC
GTCCTCAACG AGGCGGCGCT GCTCACCGCC CGCTCGAACG CGCAGCTCGT CGACAACCGC
GCGCTCGACG AGGCGATCGA CCGCGTGATC GCCGGCCCGC AGAAGCGCAC GCGCGTGATG
AACGTCAAGG AGCGCAAGCT CACCGCGTAC CACGAGGGCG GGCACGCGCT CGTCGCGGCG
GCGCTGCGGT ACACCGACCC CGTCACGAAG GTGACGATCC TGCCGCGCGG CCGTGCCCTC
GGGTACACGA TGGTGATGCC GATCGAGGAC AAGTACTCGA CCACGCGCAA CGAGCTGCTC
GACCAGCTCG CGTACGCCAT GGGCGGCCGG GTGGCCGAGG AGCTCGTGTT CCACGACCCG
ACCACCGGCG CGTCCAACGA CATCGAGAAG GCCACGGCGA CCGCCCGCAA GATGGTCACG
CAGTTCGGCA TGAGCGAGCG CGTGGGCGCC CTGCGCCTCG GCCAGGCCGA CGGCGAGGTG
TTCCTCGGCC GCGACTACGG CCACCAGCGG GAGTACTCCG AGGAGATCGC CGGCGTCGTC
GACGAGGAGG TCCGCCGTCT CATCGAGGCC GCGCACGACG AGGCGTGGGA GATCCTCACC
ACGTACCGCG ACGTGCTCGA CCAGCTCGTG CTCGAGCTCC TGGAGCGGGA GACGCTCAAC
CACGACGAGC TGGCCGAGGT CTTCACGGCG ATCACGAAGC GCGACCCGCG TCCCGTGTGG
CTGTCGAGCA ACCGCCGCGG CGTGAGCGAC CGCCCGCCCG TGAGCACGCC GGCGGAGATC
GCCGCGGGCG AGGGCGACAT GCTGCCGCAG GACCAGGCGG CCGCCGCGAA CGACGACCAC
CCGGCGACCG AGGTCCACGA GGTCCCGCCG GAGGAGCCGG TGCGGGCCGA CCGCGACGGC
GAGCCGCTGG CCTGA
 
Protein sequence
MNAKKLTRGP LLWIVLPILV LLFALNLLRG SGVQTIDTSQ GLELLRGDTV EQAQITDGYQ 
RVNLTLTENF VPAEGEDKGT SVQFYYATPQ ADEVAELIRD ADPEGGYNSV VPSTPWWSTL
LMTMLTLVLI VAVFWFFLSR MQGGNSRMMN FGKSKARQVN VENPEVTFAD VAGVDEAVEE
LVEIKEFLSE PAKFQAVGAK IPKGVLLYGP PGTGKTLIAR AVAGEAGVPF YSISGSDFVE
MFVGVGASRV RDLFEQAKTN SPAIIFVDEI DAVGRHRGAG LGGGHDEREQ TLNQLLVEMD
GFEAHTNVIL IAATNRPDIL DPALLRPGRF DRQIAVEAPD LQGRLAILRV HAKGKPMTGD
VDLEVVARRT PGFSGADLAN VLNEAALLTA RSNAQLVDNR ALDEAIDRVI AGPQKRTRVM
NVKERKLTAY HEGGHALVAA ALRYTDPVTK VTILPRGRAL GYTMVMPIED KYSTTRNELL
DQLAYAMGGR VAEELVFHDP TTGASNDIEK ATATARKMVT QFGMSERVGA LRLGQADGEV
FLGRDYGHQR EYSEEIAGVV DEEVRRLIEA AHDEAWEILT TYRDVLDQLV LELLERETLN
HDELAEVFTA ITKRDPRPVW LSSNRRGVSD RPPVSTPAEI AAGEGDMLPQ DQAAAANDDH
PATEVHEVPP EEPVRADRDG EPLA