Gene Bcav_0672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0672 
Symbol 
ID7858474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp746744 
End bp747517 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content74% 
IMG OID643864753 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002880696 
Protein GI229819170 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.607833 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACCG AGGATCGCGC GGGTCGCGAG GACGAACGGC CGGACGACGC CGTCCCGTCC 
GCGCTGCGCG TGCTGTGGGG CACCGACCGC CTCCCGCGGC GCGGCCCTCG CCCCTCCCTC
ACCGTCGACG CCATCGCGGC GGCGGCGATC GGCGTCGCCG ACGACGAGGG GCTCGCGGCC
CTCTCGATGT CCAGGCTCGC GAAGGAGCTC GGCGTCAGCA CGATGGCGCT CTACCGCTAC
GTCAGCAGCA AGGACGACGT CCTGGCGCTC ATGGCCGACC GCATCGCCCC CGACGCCTAC
GACCTGCTCG GGCCGCCGGA CGACGACTGG CGCGCGGCAC TCGAACGGTG GGCGCTCGTC
CAGCTCGACC TCATCCAGGA GCACCCCTGG ATGTTCCAGC TCACGCTGAC CACGATGGAG
ACCGGCCCGA ACCGGATGCG CTGGGTCGAC TGGGCGGTCG GGGCGTTCCG CGGCACCCGC
CTGACCGCCG GGGAGAAGCT GTCGCTCGTC GGCCTCATGG CTGCGTTCCT GCTGGCGGAG
GGTCGTCTCG TGGTGGAGGA GGCGGCGGCG GGCTCGGCGG CGCCCGACGT CACGGCCACG
ATCCTCGCCC ACGCCGACTC GGCGATGTTC CCGCACCTCG CAGCCGCGTT CCGGCCCGAC
GACGGCGACG CGGACGTCGC GGAGCTGTGG ACCGAGGGCT TCGGGGTGCG GACGCTGCTC
GACGGCATCG CCGTCATCGT CGAGCGCGCC GATGCCGCCC GCGGCGGCGC CTGA
 
Protein sequence
MDTEDRAGRE DERPDDAVPS ALRVLWGTDR LPRRGPRPSL TVDAIAAAAI GVADDEGLAA 
LSMSRLAKEL GVSTMALYRY VSSKDDVLAL MADRIAPDAY DLLGPPDDDW RAALERWALV
QLDLIQEHPW MFQLTLTTME TGPNRMRWVD WAVGAFRGTR LTAGEKLSLV GLMAAFLLAE
GRLVVEEAAA GSAAPDVTAT ILAHADSAMF PHLAAAFRPD DGDADVAELW TEGFGVRTLL
DGIAVIVERA DAARGGA