Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_0672 |
Symbol | |
ID | 7858474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 746744 |
End bp | 747517 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643864753 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_002880696 |
Protein GI | 229819170 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.607833 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACACCG AGGATCGCGC GGGTCGCGAG GACGAACGGC CGGACGACGC CGTCCCGTCC GCGCTGCGCG TGCTGTGGGG CACCGACCGC CTCCCGCGGC GCGGCCCTCG CCCCTCCCTC ACCGTCGACG CCATCGCGGC GGCGGCGATC GGCGTCGCCG ACGACGAGGG GCTCGCGGCC CTCTCGATGT CCAGGCTCGC GAAGGAGCTC GGCGTCAGCA CGATGGCGCT CTACCGCTAC GTCAGCAGCA AGGACGACGT CCTGGCGCTC ATGGCCGACC GCATCGCCCC CGACGCCTAC GACCTGCTCG GGCCGCCGGA CGACGACTGG CGCGCGGCAC TCGAACGGTG GGCGCTCGTC CAGCTCGACC TCATCCAGGA GCACCCCTGG ATGTTCCAGC TCACGCTGAC CACGATGGAG ACCGGCCCGA ACCGGATGCG CTGGGTCGAC TGGGCGGTCG GGGCGTTCCG CGGCACCCGC CTGACCGCCG GGGAGAAGCT GTCGCTCGTC GGCCTCATGG CTGCGTTCCT GCTGGCGGAG GGTCGTCTCG TGGTGGAGGA GGCGGCGGCG GGCTCGGCGG CGCCCGACGT CACGGCCACG ATCCTCGCCC ACGCCGACTC GGCGATGTTC CCGCACCTCG CAGCCGCGTT CCGGCCCGAC GACGGCGACG CGGACGTCGC GGAGCTGTGG ACCGAGGGCT TCGGGGTGCG GACGCTGCTC GACGGCATCG CCGTCATCGT CGAGCGCGCC GATGCCGCCC GCGGCGGCGC CTGA
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Protein sequence | MDTEDRAGRE DERPDDAVPS ALRVLWGTDR LPRRGPRPSL TVDAIAAAAI GVADDEGLAA LSMSRLAKEL GVSTMALYRY VSSKDDVLAL MADRIAPDAY DLLGPPDDDW RAALERWALV QLDLIQEHPW MFQLTLTTME TGPNRMRWVD WAVGAFRGTR LTAGEKLSLV GLMAAFLLAE GRLVVEEAAA GSAAPDVTAT ILAHADSAMF PHLAAAFRPD DGDADVAELW TEGFGVRTLL DGIAVIVERA DAARGGA
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