Gene Bcav_0578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0578 
Symbol 
ID7861041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp640182 
End bp641405 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content67% 
IMG OID643864658 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002880603 
Protein GI229819077 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCCCG CGTCAGAGAC GATGCCCCGC GCGACCAGAA CCACCCGCTG GTGGGTGGTC 
GCCCTGTTGT TCTTCCTCGG TTGGCTCTTC ATCTACGCCG ACCGCACGAT CCTCAACCCG
GTCATGTCCG AGATCGGCTC GGAGTTCGGC CTCGACAAGG CCGGGCTCGG GCTCCTCAAC
TCGGTGTTCT TCCTGGTGTA CGCGCTCGTC CAGGTCCCCT CGGGGATGCT CGGCGACAAG
TACGGCCGCC TCAAGTTCAT CGTGTTCGGG TTCATCGTCT TCGGCCTCTT CACGGGCCTG
ACCGGCATCG CCGGCGCCGT CGGCGTGCTC TTCCTGATGC GCGCGATGGC GGGCTTCGGG
CAGGGCTTCT ACTACGGCCC GCAGTACTCG CTCTCCGGGG AGATGATCCC GGAGCGCTTC
CGCACCGTCG GCAGCGCCCT CATCAACTCG GGCCAGGCGT TCGGCATCTC GATCGGCCTC
ATCGCGTCAA GCTACATCGC GTTCGACCTC GACCTCGGCT GGCGCGGGCC GTTCTACGTG
TTCGCCCTGC CGACGATCGT CGTCGGCCTG GCCATGTGGG TGTTCATCAA GGAGCCGGCG
CGCCCGACGC CGTCGGCGGG GGACGAGCCG AAGCCCACCG TCCTCAGCCT GTTCAAGAGC
AAGAACCTCG TGCGCACGTT CGTCATGGTG TTCTGCTCGA TCTACGGGTT CTTCGTCATG
ATCACGTGGC TCCCCACCTA CCTCAACGAG GTGCGCGGCG TCGCCCTGGA GGACACGGGG
TTCGTGTCGT CGCTCGCGGC GTGGACGTCG GTGCCGGCGG CCCTCGTCTT CGCGTACTTC
TCCGACCGCA TCGGACGCCG CAAGCCGCTG CTGCTCATCG TCTTCCCGGC CGCGATCGCG
TCGATCCTGC TGCTCGTGTT CGCACCGTCC ATGCCGCTCG TCATCGTCGC GCTCGTGCTG
TACGGCCTCA CCGGCAAGCT CGCCACGGAC CCGCTGCTCA TCGCCCTCTG CGGCGTGAAC
TCGCCGAAGG CGATCACGGC GACGGCGTTC GGGCTGTTCA ACTTCATCGG GATGTCGGCG
TCGATCCTCG CGCCCTACAT CACCGGGTTC CTCGTCGAGG CGACAGGCGA GTGGAACGTG
GGCTTCTACC TGGCGATCGG CCTGCTCGTC GTCGCCATCC TCGCCGCGCT CGGCATCAAG
GAGAACAGAA AGGCCGTGAG CTGA
 
Protein sequence
MHPASETMPR ATRTTRWWVV ALLFFLGWLF IYADRTILNP VMSEIGSEFG LDKAGLGLLN 
SVFFLVYALV QVPSGMLGDK YGRLKFIVFG FIVFGLFTGL TGIAGAVGVL FLMRAMAGFG
QGFYYGPQYS LSGEMIPERF RTVGSALINS GQAFGISIGL IASSYIAFDL DLGWRGPFYV
FALPTIVVGL AMWVFIKEPA RPTPSAGDEP KPTVLSLFKS KNLVRTFVMV FCSIYGFFVM
ITWLPTYLNE VRGVALEDTG FVSSLAAWTS VPAALVFAYF SDRIGRRKPL LLIVFPAAIA
SILLLVFAPS MPLVIVALVL YGLTGKLATD PLLIALCGVN SPKAITATAF GLFNFIGMSA
SILAPYITGF LVEATGEWNV GFYLAIGLLV VAILAALGIK ENRKAVS