| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0563 |
|---|
| Symbol | |
|---|
| ID | 7857929 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 622211 |
|---|
| End bp | 623491 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 643864643 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_002880588 |
|---|
| Protein GI | 229819062 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.55774 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCCGACC CCACCGAGCT CGTCGCCGAC TGGCGCGAGG CGCCCGACGT CCGCGCCGTC
CAGCACCGCA CCCGCCGCGT GCTCGTGTCC GCGCAGGTGC TCGGCTCGGT CGGGATGGGC
GCCTCGGCGT CCGTCGGGAT CCTCCTCGCG GAGCAGGTGA CGCAGTCGGA GACCTGGGCG
GGGGTGGCAC GGACGTCGAC GACGCTCGGT GCCGCGCTCG TCTCGCTGCC GCTCGCGCTG
CTCGCCGCCC GCGCCGGACG GCGGACGGCG CTGAGCGCCG GCTGGTCGGT CGCGCTGCTC
GGCGCCGTCC TCCTCGTGCT CGCCGCCGCG ACGTCGTCGA CGGTGCTGCT CGTCCTCGGC
ATGCTGGCGT TCGGCGCGGG GTCGGCGACC GGGCTGCAGT CCCGGTTCGC GGCCACCGAC
CTCGAGGTGC CGGCCCATCG CGCCCGGACC CTGTCGATCG TCGTGTGGGC CATGACGATC
GGCTCCGTGC TCGGCCCGAA CCTGGGAGCG CCCGGCGAGC TGGTCGAGAG CTGGTTCGGG
CTCCCGGAGC TCTCCGGCGC GTTCGTCATC AGCGCCGCCG GGCTCACGGC CACCGTGATC
ATCCTGCTCG TCTTCCTGCG TCCGGATCCC GTGGCCGTCG CCGCGGCGAA GGCCGGCCCC
GACGCCGTGC CCGCCCCGAA GGCACGGGGG AGCCTCGTGC TCGGGCTGCG GGCGATCGTC
GCGACGGCGC CCGCCCGGTT CGCGTTCGTC GCGCTCGTGC TCGCGCACAC GTCGATGGTC
CTGCTCATGA CGATGACGCC GGTGCACATG CACCACCACG GCGGCACCGT GGAGATCATC
GGGCTCGTCA TCAGCGGCCA CGTGCTCGGC ATGTTCGCGT TCTCGCCGCT GGTGGGCGCG
CTGGCCGACC GGATCGGACG GATCGCCACG ATCCTCATCG GCCAGGCCGT GCTGCTGGCC
GCCGCCGTCG CCGCCATCGG GTGGAGCGGC GGGACCGGGG GCGTCACGGT CGCGCTGTTC
CTGCTCGGTC TCGGCTGGTC GTTCGTGACG ATCCCGGCCG CGACGGTCGT GTCCGACGCC
GTCGCGCCGG CCGTGCGGAA CGTCGTCCAG GGCACGTCCG ACACCGCGAT GAACGTCGTC
GCCGCCGTCG CGGCCGGCGT CTCGGGTCCG CTGCTCGCCG TCGTCGGCTT CGCGAACCTC
GCCTGGGGCG TCGTCGCGCT CGTGATCCCG GTGGCCGTGC TCGCCCTCCC GCTGCGGCGC
GGCGTCGACC GCGCCGCGTG A
|
|---|
| Protein sequence | MPDPTELVAD WREAPDVRAV QHRTRRVLVS AQVLGSVGMG ASASVGILLA EQVTQSETWA
GVARTSTTLG AALVSLPLAL LAARAGRRTA LSAGWSVALL GAVLLVLAAA TSSTVLLVLG
MLAFGAGSAT GLQSRFAATD LEVPAHRART LSIVVWAMTI GSVLGPNLGA PGELVESWFG
LPELSGAFVI SAAGLTATVI ILLVFLRPDP VAVAAAKAGP DAVPAPKARG SLVLGLRAIV
ATAPARFAFV ALVLAHTSMV LLMTMTPVHM HHHGGTVEII GLVISGHVLG MFAFSPLVGA
LADRIGRIAT ILIGQAVLLA AAVAAIGWSG GTGGVTVALF LLGLGWSFVT IPAATVVSDA
VAPAVRNVVQ GTSDTAMNVV AAVAAGVSGP LLAVVGFANL AWGVVALVIP VAVLALPLRR
GVDRAA
|
|---|
| |