| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0494 |
|---|
| Symbol | |
|---|
| ID | 7857858 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 548168 |
|---|
| End bp | 548509 |
|---|
| Gene Length | 342 bp |
|---|
| Protein Length | 113 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643864572 |
|---|
| Product | transcriptional regulator, PadR-like family |
|---|
| Protein accession | YP_002880519 |
|---|
| Protein GI | 229818993 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1695] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.396761 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATGG ATGACACGTC CGCTGGGCAC CTGCAGGAAC TCCGCCGCGG CACGGTCGTG
CTCGCGAGCC TGGTGTGCCT GCGTGAAGCC GGATACGGCT ACGCGCTGCT CGACCAGCTC
GACGGGCTGG GCATCTCCGT CGACGCGAGC ACGCTGTACC CGCTGCTCCG CCGCCTCGAG
AAGCAGGGGC TTCTCGTCAG CGAGTGGAAC ACCGACGAGG CGCGGCCCCG CAAGTTCTAC
CGCACCTCGC CCGCGGGCGA GGCTCTCACC GCCGCGCTCG TCGCCGACTG GCGACGGCTG
AACGACTCGA TCGAATCCCT TCTGAAGGAG AACCCCTCAT GA
|
|---|
| Protein sequence | MSMDDTSAGH LQELRRGTVV LASLVCLREA GYGYALLDQL DGLGISVDAS TLYPLLRRLE
KQGLLVSEWN TDEARPRKFY RTSPAGEALT AALVADWRRL NDSIESLLKE NPS
|
|---|
| |