Gene Bcav_0457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0457 
Symbol 
ID7860717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp508359 
End bp510959 
Gene Length2601 bp 
Protein Length866 aa 
Translation table11 
GC content75% 
IMG OID643864535 
Productprotein of unknown function DUF214 
Protein accessionYP_002880482 
Protein GI229818956 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.306104 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.015476 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGCG TCGCGTGGCG CGAGGTCCGC GAGCACCTCG GCCGCTTCGG GCTCTCCGTG 
CTCGCCGTGC TGCTCGGCGT CGCGTTCGTG ACCGGCACGT TCTCGTTGCG CGCCATGCTC
TCGGCGACGT TCTCGTCCAT CGTCCAGAGC ACGATCCAGG GCGACGCGTA TCTGCGGGGT
CCCGCCGTGG CCGACTCCGA CGACGCCGGC GGCTTCGATC CCGCGGACGG ACCGCCGGAG
GGCGGCTCCT CCGGCGCGAT GTTCGGGGGC GGCGGACGCG CGCTCGTCCC GCTCACGCTG
GCGGACGACG CCGCGGCGAT CGACGGCGTC GCGCAAGCGG TGCCCGACGT CTCCGGTCCA
CTCGTGCTCG TCGGCGCCGA CGGCGAGGCC GTGATCAACG GGCAGGCGCC GTCGATCGGC
GTCGCGCTGG CGGACGACGA CCCGGGCGTG ACGATCGTCG AGGGACGCGC GCCCCGCGCC
GCCGACGAGG TCGCGCTCGA GACGGGCGCG CTCGCGGCGT CCGGGCTCGC CGTCGGGGAC
GCGACGCAGG TCGTGCTCGG CGACTCGGTG CGCGAGGTGA CGGTGGTCGG CGAGGCGAGC
CTCGGCACGC CGGCCGCCGG GGCCACGCTC ACGTTCCTGG ACCTCGACAC CGCGACGGCC
GCCTACGCTC CCGAGGGACT CGTGGGCTCG GTGGCGATCT ACGCCGAGGA CGGCGTCGCC
CTCGACGACC TGCTCGCCGC GCTCGAGCCG CTCGCCACCG ACGACGTCGA GGTGGCCTCC
GGCGACGAGC TGCGCGAGGA GGCGAACGCC CAGGTCCAGT CGATCCTCGG TTTCCTCGGC
ACGTTCCTCC TCGTGTTCGC GGGGATCTCG CTCTTCGTGG GCGCCTTCAT CGTGGCCAAC
GCGTTCGCCA TGTCGGTGCG GCAGCGGCAG CGCGACTTCG CCCTGCTGCG GGCGCTGGGC
GCCTCGCCCG GCCAGGTGTT CGGCGTCGTC CTCGTGCAGG CGGCCGTGGT GGGACTCGTG
GGCTCGGCGG TCGGCGCCGT GGCCGGGTAC GGGCTCGTGC ACGTGGTGCG CGCCGGCCTG
CGGTCCGTGT TCGGGCTGAC GCTCTCCGGG GAGATCCCGC TGTCCGCGGC GACCATCGCC
GCGTGCGTCG TCGCCGGCAC GCTCGTGAGC GTGGTCGCGG CGGCGATCCC CGCACGCCGC
GCGGCGCTGA CCGCACCCGT CGAGGCCATG CGGGACGACG TCGTCGTCAC GGAACGGTCG
CTGCTGCTGC GGGCGATCGT CGGGACCGTG CTGCTCGTGC TGGGCGCCGC GGGCGTGGTG
GCGGCGGTCC GTGACGCGGA CGCGGCCCTG CCCGGAGGCC GCGGCCTGTG GCTCGGGGTC
GGGGCGGGCG CGGCGCTGCT CGGGACGATC GCCATCGCCC CCGTGATCGC GCGGGCGTGC
GCCCGGGTGC TGGCACTGCC CTTCCTGCCG ATCAAGCCGC TCGGCGCTCT CGCGCGCGGC
AACGTGACGC GCAACCCGCG CCGGACGGCG TCGACGGCGA GCGCGCTGCT CATCGGGATG
GCGCTCGTCG CGGCGTGCGC GGTGATCGCC GCCTCGGCGC AGGCGTCGAC GCGGTCGATC
GTGACGACGG AGGTCGCCGC CGACCTCATG GTGCGGTCCG CGACGGGGGT GGTCCCGGCC
GACGCCGTGG CCGCCGTCGA GGGGGTGCCC GGCGTCGGGA CGGCCGACGC CGTGCGGTTC
GGCGAGGGCC GGACGGAGGG TCCCGAGGGC GGCTCGGAGA CCGCCACCCT CGGCGGGATC
GACGCCGAGG GCGTGCAGCG GGCGTTCACT CTCGACGTCC GCTCCGGGTC GCTCGACGCG
CTGGCTGACG GCGAGGTCGC CGTGCAGCAG CGCGTCGCCG TCGAGCAGGG CTGGGCGGTG
GGGGACTCGA TCGAGCTGAC CGGCGACGGC GGCGCGAGGC TGACGACGTC GATCGGCGCC
GTCATCGACT CGCAGGTCGT GGCCGTGGAC GTGCTGCTGG CGGACGAGCA GTTCGACGAG
ATCATGCGGC AGCCGCAGGT CGCGGCGGTG CTCGTGGACG CGGCACCGGG GACCTCGGTG
GCCGACCTCG GCGACGCGTT GGACACCGCG CTCGAACCGT TCGTCGTGGT CTCCGCCCTC
GACGCCGACG AGCTGACGTC GCTGCTCGGC GACATGGTCG ACCAGGCCCT CGCGATCCTG
TACGCCCTGC TCGCGCTGTC GGTGATCATC GCCGTGCTCG GGATCGTCAA CACGCTCGCG
CTCTCCGTGG TCGAGCGGAC TCGCGAGATC GGGCTGCTGC GTGCCGTCGG GCTCGGGCGG
CTGCAGCTCG GAGCGACGAT CACCATCGAG TCGATCCTCA TCGCGGTGTT CGGCACGTTC
GTGGGCGTGG CGGTCGGGGT CGCCTTGGCG GCCGCGCTGC CGTCGGTCTA CGCCGACCAG
GGGCTGTCCG TGCTCGCCGT GCCCTGGGAC CGGATCGGGC TCATCCTCGC GCTCGCCGTG
GTGGTGGGGC TGGTGGCGGC GGTCGGCCCG GCCGTGCGCG CCTCGCGCCT GCCCGTGCTC
GAGGCCATCT CCACCGAGTA G
 
Protein sequence
MRRVAWREVR EHLGRFGLSV LAVLLGVAFV TGTFSLRAML SATFSSIVQS TIQGDAYLRG 
PAVADSDDAG GFDPADGPPE GGSSGAMFGG GGRALVPLTL ADDAAAIDGV AQAVPDVSGP
LVLVGADGEA VINGQAPSIG VALADDDPGV TIVEGRAPRA ADEVALETGA LAASGLAVGD
ATQVVLGDSV REVTVVGEAS LGTPAAGATL TFLDLDTATA AYAPEGLVGS VAIYAEDGVA
LDDLLAALEP LATDDVEVAS GDELREEANA QVQSILGFLG TFLLVFAGIS LFVGAFIVAN
AFAMSVRQRQ RDFALLRALG ASPGQVFGVV LVQAAVVGLV GSAVGAVAGY GLVHVVRAGL
RSVFGLTLSG EIPLSAATIA ACVVAGTLVS VVAAAIPARR AALTAPVEAM RDDVVVTERS
LLLRAIVGTV LLVLGAAGVV AAVRDADAAL PGGRGLWLGV GAGAALLGTI AIAPVIARAC
ARVLALPFLP IKPLGALARG NVTRNPRRTA STASALLIGM ALVAACAVIA ASAQASTRSI
VTTEVAADLM VRSATGVVPA DAVAAVEGVP GVGTADAVRF GEGRTEGPEG GSETATLGGI
DAEGVQRAFT LDVRSGSLDA LADGEVAVQQ RVAVEQGWAV GDSIELTGDG GARLTTSIGA
VIDSQVVAVD VLLADEQFDE IMRQPQVAAV LVDAAPGTSV ADLGDALDTA LEPFVVVSAL
DADELTSLLG DMVDQALAIL YALLALSVII AVLGIVNTLA LSVVERTREI GLLRAVGLGR
LQLGATITIE SILIAVFGTF VGVAVGVALA AALPSVYADQ GLSVLAVPWD RIGLILALAV
VVGLVAAVGP AVRASRLPVL EAISTE