Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_0457 |
Symbol | |
ID | 7860717 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 508359 |
End bp | 510959 |
Gene Length | 2601 bp |
Protein Length | 866 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 643864535 |
Product | protein of unknown function DUF214 |
Protein accession | YP_002880482 |
Protein GI | 229818956 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.306104 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.015476 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCGCG TCGCGTGGCG CGAGGTCCGC GAGCACCTCG GCCGCTTCGG GCTCTCCGTG CTCGCCGTGC TGCTCGGCGT CGCGTTCGTG ACCGGCACGT TCTCGTTGCG CGCCATGCTC TCGGCGACGT TCTCGTCCAT CGTCCAGAGC ACGATCCAGG GCGACGCGTA TCTGCGGGGT CCCGCCGTGG CCGACTCCGA CGACGCCGGC GGCTTCGATC CCGCGGACGG ACCGCCGGAG GGCGGCTCCT CCGGCGCGAT GTTCGGGGGC GGCGGACGCG CGCTCGTCCC GCTCACGCTG GCGGACGACG CCGCGGCGAT CGACGGCGTC GCGCAAGCGG TGCCCGACGT CTCCGGTCCA CTCGTGCTCG TCGGCGCCGA CGGCGAGGCC GTGATCAACG GGCAGGCGCC GTCGATCGGC GTCGCGCTGG CGGACGACGA CCCGGGCGTG ACGATCGTCG AGGGACGCGC GCCCCGCGCC GCCGACGAGG TCGCGCTCGA GACGGGCGCG CTCGCGGCGT CCGGGCTCGC CGTCGGGGAC GCGACGCAGG TCGTGCTCGG CGACTCGGTG CGCGAGGTGA CGGTGGTCGG CGAGGCGAGC CTCGGCACGC CGGCCGCCGG GGCCACGCTC ACGTTCCTGG ACCTCGACAC CGCGACGGCC GCCTACGCTC CCGAGGGACT CGTGGGCTCG GTGGCGATCT ACGCCGAGGA CGGCGTCGCC CTCGACGACC TGCTCGCCGC GCTCGAGCCG CTCGCCACCG ACGACGTCGA GGTGGCCTCC GGCGACGAGC TGCGCGAGGA GGCGAACGCC CAGGTCCAGT CGATCCTCGG TTTCCTCGGC ACGTTCCTCC TCGTGTTCGC GGGGATCTCG CTCTTCGTGG GCGCCTTCAT CGTGGCCAAC GCGTTCGCCA TGTCGGTGCG GCAGCGGCAG CGCGACTTCG CCCTGCTGCG GGCGCTGGGC GCCTCGCCCG GCCAGGTGTT CGGCGTCGTC CTCGTGCAGG CGGCCGTGGT GGGACTCGTG GGCTCGGCGG TCGGCGCCGT GGCCGGGTAC GGGCTCGTGC ACGTGGTGCG CGCCGGCCTG CGGTCCGTGT TCGGGCTGAC GCTCTCCGGG GAGATCCCGC TGTCCGCGGC GACCATCGCC GCGTGCGTCG TCGCCGGCAC GCTCGTGAGC GTGGTCGCGG CGGCGATCCC CGCACGCCGC GCGGCGCTGA CCGCACCCGT CGAGGCCATG CGGGACGACG TCGTCGTCAC GGAACGGTCG CTGCTGCTGC GGGCGATCGT CGGGACCGTG CTGCTCGTGC TGGGCGCCGC GGGCGTGGTG GCGGCGGTCC GTGACGCGGA CGCGGCCCTG CCCGGAGGCC GCGGCCTGTG GCTCGGGGTC GGGGCGGGCG CGGCGCTGCT CGGGACGATC GCCATCGCCC CCGTGATCGC GCGGGCGTGC GCCCGGGTGC TGGCACTGCC CTTCCTGCCG ATCAAGCCGC TCGGCGCTCT CGCGCGCGGC AACGTGACGC GCAACCCGCG CCGGACGGCG TCGACGGCGA GCGCGCTGCT CATCGGGATG GCGCTCGTCG CGGCGTGCGC GGTGATCGCC GCCTCGGCGC AGGCGTCGAC GCGGTCGATC GTGACGACGG AGGTCGCCGC CGACCTCATG GTGCGGTCCG CGACGGGGGT GGTCCCGGCC GACGCCGTGG CCGCCGTCGA GGGGGTGCCC GGCGTCGGGA CGGCCGACGC CGTGCGGTTC GGCGAGGGCC GGACGGAGGG TCCCGAGGGC GGCTCGGAGA CCGCCACCCT CGGCGGGATC GACGCCGAGG GCGTGCAGCG GGCGTTCACT CTCGACGTCC GCTCCGGGTC GCTCGACGCG CTGGCTGACG GCGAGGTCGC CGTGCAGCAG CGCGTCGCCG TCGAGCAGGG CTGGGCGGTG GGGGACTCGA TCGAGCTGAC CGGCGACGGC GGCGCGAGGC TGACGACGTC GATCGGCGCC GTCATCGACT CGCAGGTCGT GGCCGTGGAC GTGCTGCTGG CGGACGAGCA GTTCGACGAG ATCATGCGGC AGCCGCAGGT CGCGGCGGTG CTCGTGGACG CGGCACCGGG GACCTCGGTG GCCGACCTCG GCGACGCGTT GGACACCGCG CTCGAACCGT TCGTCGTGGT CTCCGCCCTC GACGCCGACG AGCTGACGTC GCTGCTCGGC GACATGGTCG ACCAGGCCCT CGCGATCCTG TACGCCCTGC TCGCGCTGTC GGTGATCATC GCCGTGCTCG GGATCGTCAA CACGCTCGCG CTCTCCGTGG TCGAGCGGAC TCGCGAGATC GGGCTGCTGC GTGCCGTCGG GCTCGGGCGG CTGCAGCTCG GAGCGACGAT CACCATCGAG TCGATCCTCA TCGCGGTGTT CGGCACGTTC GTGGGCGTGG CGGTCGGGGT CGCCTTGGCG GCCGCGCTGC CGTCGGTCTA CGCCGACCAG GGGCTGTCCG TGCTCGCCGT GCCCTGGGAC CGGATCGGGC TCATCCTCGC GCTCGCCGTG GTGGTGGGGC TGGTGGCGGC GGTCGGCCCG GCCGTGCGCG CCTCGCGCCT GCCCGTGCTC GAGGCCATCT CCACCGAGTA G
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Protein sequence | MRRVAWREVR EHLGRFGLSV LAVLLGVAFV TGTFSLRAML SATFSSIVQS TIQGDAYLRG PAVADSDDAG GFDPADGPPE GGSSGAMFGG GGRALVPLTL ADDAAAIDGV AQAVPDVSGP LVLVGADGEA VINGQAPSIG VALADDDPGV TIVEGRAPRA ADEVALETGA LAASGLAVGD ATQVVLGDSV REVTVVGEAS LGTPAAGATL TFLDLDTATA AYAPEGLVGS VAIYAEDGVA LDDLLAALEP LATDDVEVAS GDELREEANA QVQSILGFLG TFLLVFAGIS LFVGAFIVAN AFAMSVRQRQ RDFALLRALG ASPGQVFGVV LVQAAVVGLV GSAVGAVAGY GLVHVVRAGL RSVFGLTLSG EIPLSAATIA ACVVAGTLVS VVAAAIPARR AALTAPVEAM RDDVVVTERS LLLRAIVGTV LLVLGAAGVV AAVRDADAAL PGGRGLWLGV GAGAALLGTI AIAPVIARAC ARVLALPFLP IKPLGALARG NVTRNPRRTA STASALLIGM ALVAACAVIA ASAQASTRSI VTTEVAADLM VRSATGVVPA DAVAAVEGVP GVGTADAVRF GEGRTEGPEG GSETATLGGI DAEGVQRAFT LDVRSGSLDA LADGEVAVQQ RVAVEQGWAV GDSIELTGDG GARLTTSIGA VIDSQVVAVD VLLADEQFDE IMRQPQVAAV LVDAAPGTSV ADLGDALDTA LEPFVVVSAL DADELTSLLG DMVDQALAIL YALLALSVII AVLGIVNTLA LSVVERTREI GLLRAVGLGR LQLGATITIE SILIAVFGTF VGVAVGVALA AALPSVYADQ GLSVLAVPWD RIGLILALAV VVGLVAAVGP AVRASRLPVL EAISTE
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