Gene Bcav_0456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0456 
Symbol 
ID7860716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp506170 
End bp507984 
Gene Length1815 bp 
Protein Length604 aa 
Translation table11 
GC content76% 
IMG OID643864534 
Producthypothetical protein 
Protein accessionYP_002880481 
Protein GI229818955 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0108814 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCGAGG ACGACACCCG CGAGCAGGAC GTCCTCGACG ACCTGCTCAC GGACGACGAC 
GCTGCGCGCC CTGCTCGGGG ACGTCGCACC GGGCGCCGCA TCGTCGGCTG GTCCATCGCC
GCGCTCCTGG TCGCCGTCGT CGCCGCCGCG GCCCTGCTCG CGCTCGACGC CCTCCGCGCC
CGCGACGCCC TCGCCGAGGC CGTCCCGCTG GTCCAGGCCG CCGAGCAGCA GCTCGAGGCC
GACCCGACGG CCGACGTCGA CCTCGCCCAC CTCCAGGACC TCACGACCAC CGCGCGCACC
AGCACCGACG GCCCGCTCTG GTGGCTCGCC GCACGGCTCC CCGGCCTCGG TGCGGACGTC
CACGCCGTGA GCGTGAGCGC CGACGCCGTC GACGTCGTGA CCCACGACGT GCTGCCGCCG
CTGCTCGCAG CCCGCGACGG CGTCGACCTC GCCGCCCTGC GACCCGTGGA CGGTCGCGTC
GACCTCGCCC CGATCCAGGC CGCTGCACCG CTGGTGCGCG AGGCGAGCGA CGCGCTCGCC
GGCGTCGTCG CCGACGTGGC CGCGCTCGAC CCCGCCGAGC TGCGCGGCGC CGTCGCCGGA
CCGGTCGAGT CGCTGCAGGC CGGCCTCGCC ACGCTGGACG AGCAGCTCAC GAGCGCCCGA
GCCGTCACCA CCGTCCTTCC CCCGCTGCTC GGTGCCGACG GCGAGCAGCG GTACCTCGTG
CTGTTCCTCA CCAACTCCGA GCTGCGCTCC GCGGGCGGGA TCCCCGGTGC CCTGGCCGTT
CTCACCGCCG ACGACGGCCG GGTCGCGCTC ACCGACCAGG TCTCCACCGC CGACGTCGGG
CCGTTCGACG ACCCGGTTCC GGGCCTCGCC CCGGAGGACG CGGAGATCTT CGGCGACCGC
CCGGCCCGGT ACATCCAGGA CACGACGATG CTCCCCGACT TCCCGAGCGC GGCGTCCCTC
GCGGCGACCA TGTGGGAGGC GTCCGGCCGT GGCGCGGTGG ACGGCGTCAT CTCCGTGGAC
CCGGTGGCCC TGTCGTACGT CCTCACCTCG ACCGGGCCGG TGGACGTGCC GGGCGGCCGG
ATCGACGCGG ACGGCGCCGT CGACCTCCTC CTGAGCGGCG CGTACGCGAT GTTCCCGGAG
CCGGCGCAGC AGGACGAGTT CTTCGCCGGC GTCAGCGCCG CCGTGTTCGG CTCGGCGCTC
GGCGGCGCGG TCGACCCGAG CCTGCTCGCG ACGGCCGTCG AGCGGGCCGC GCAGGAGCAC
CGGATCAACG TCTGGAGCCG TGACGCGGAC CTGCAGGCCG ACCTCGTGGG CCTCGGCGTC
GGCGGATCGC TCGCGGCCGA ACCCGCCGCC TCCGGCGTCT TCCTCAACGA CGGCACCGGC
GCCAAACTCG ACTACTACCT CGACGTCGAG ACGACGAGCG TCGCCGCCTG CGCCGCCGAC
GCCGACGCCG TCACGCTCAC GCGGACCGTC ACGCTGACGT CGAGCGTGCC CGCCGACGTC
GCGCAGCTGC CGTGGTACGT CCTCGGCTCC GCGGGTGCCG GCTCGCTCGA GCCCGGCGTG
CTCCGCACGA ACGTCGCGAT CTACTCCCCC GCCGGCGGCT CGATCGATTC CATCGCGCGG
GACGGCGTCG TCATCGGTGG AGACGTGCAC GACGACGGCG CCGGCCGGCA GGTCACCGTC
GTCACCGTGG AGCTGGCGCC GGGTGAGTCC ACGACGCTGA CCGTCACCAC GAGCGGCGCG
GCCGGCGCCG GCGGGACCTG GATGACACCG ACGGCGCGCC ACGGCGGCGA CGCCGCCGTG
GCCACCTGCG GGTGA
 
Protein sequence
MREDDTREQD VLDDLLTDDD AARPARGRRT GRRIVGWSIA ALLVAVVAAA ALLALDALRA 
RDALAEAVPL VQAAEQQLEA DPTADVDLAH LQDLTTTART STDGPLWWLA ARLPGLGADV
HAVSVSADAV DVVTHDVLPP LLAARDGVDL AALRPVDGRV DLAPIQAAAP LVREASDALA
GVVADVAALD PAELRGAVAG PVESLQAGLA TLDEQLTSAR AVTTVLPPLL GADGEQRYLV
LFLTNSELRS AGGIPGALAV LTADDGRVAL TDQVSTADVG PFDDPVPGLA PEDAEIFGDR
PARYIQDTTM LPDFPSAASL AATMWEASGR GAVDGVISVD PVALSYVLTS TGPVDVPGGR
IDADGAVDLL LSGAYAMFPE PAQQDEFFAG VSAAVFGSAL GGAVDPSLLA TAVERAAQEH
RINVWSRDAD LQADLVGLGV GGSLAAEPAA SGVFLNDGTG AKLDYYLDVE TTSVAACAAD
ADAVTLTRTV TLTSSVPADV AQLPWYVLGS AGAGSLEPGV LRTNVAIYSP AGGSIDSIAR
DGVVIGGDVH DDGAGRQVTV VTVELAPGES TTLTVTTSGA AGAGGTWMTP TARHGGDAAV
ATCG