| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0381 |
|---|
| Symbol | |
|---|
| ID | 7859074 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 426665 |
|---|
| End bp | 428344 |
|---|
| Gene Length | 1680 bp |
|---|
| Protein Length | 559 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643864457 |
|---|
| Product | Tetratricopeptide TPR_2 repeat protein |
|---|
| Protein accession | YP_002880407 |
|---|
| Protein GI | 229818881 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.850569 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGACGA CGCCGTACCC CTTCGATCTC GGGACGCACA CGCGCCGCAC CTCGACGTCG
TCGCCGGAGG CGGCCCAGTG GTTCGACCGC GGCCTGGTCT GGAGCTACGC CTTCCACCAC
GAGGAGGCGG TGCGCTGCTT CGAGAGGGCG CTCCGAGCGG ATCCGCGGTT CGCCCTCGCG
CACTGGGGCA TCGCGTACGC GATCGGCCCC AACTACAACC TCGCGTTCGA CCTCTACCCG
CCCGAGGACC TGCCCGGCAT GCTCGCCCGG GCAGCGGCCG AGCTGGCGCG GGCGCGTGAG
CTCGCCGACG GCGCGCCGGA GGTCGAACGG GCGCTCATCG AGGCCCTCAG CACCCGGTTC
CCGACCGACC CGGCCGCGGA CTTCGCGGCG TACAACCGGG CCTACGCGAC GGCGATGGCG
CGTGCGGCGG CGCTGCACCC GGACGACCTC GACGTGATCG CGCTCCACGC CGACGCGCTG
CTCAACGTCA CCCCGTGGAA GCTGTGGTCG GTGGCCACCG GCGAGCCGGC GGAGGGGGCG
AGCACGCTCG AGGCCAAGGC GCTGCTCGAG GATGCGCTGG CGCGACCCGG CGCGATGACC
CATCCCGGGC TGCTGCACCT GTACGTGCAC CTCATGGAGA TGTCGCCCAC CCCCGAGCTG
GCGCTCCCCG CCGCTGACGC CCTGCGCCAC CTGGTGCCGG ACGCCGGGCA CCTGTTGCAC
ATGCCGACCC ACATCGACGT CCTCGTCGGC GACTACGAGA GCGTCATCGC CGGCAACACG
GCAGCGATCG AGGCCGACGA GCGTTGGGTG GCCGCATCGG CGGCGTCTGG CGACGAGGCG
CCCTTCTACG CGCTGTACCG CGCGCACGAC CGGCACTTCC GCATCTACGG AGCGATGTTC
GCTGGCCGGT TCGAGATCGC GCGGGCGACG GCGGAGGACC TGGAGGAGAG CGTCGCGCGT
GAGCTGGTGC GCGATCCCGG CATGGCGGAC TTCGTCGAAG GGTTCGCCGG CATGCGGCTG
CACGTCCTCG TGCGCTTCGG CCGGTGGGAC GAGCTGACGG CGCACCCGCT GCCCGCCGAC
CCTGACCTGT ACTGCGTCAC CACCGCCCTC ACGCACTACG CGCGCGGCGT CGCCTTCGCC
GCCCTCGGCC GGGTCGCCGA GGCCGAGGGC GAACGTGCGT CGTTCGTCGC CGCGTCGGCG
CGCGTCCCCG AGTCGCGCTA CCTCTTCAAC AACACCTGCC GCGACATCCT CGCCGTCGCG
TCGGCGATGC TCGACGGCGA GATCGCCTAC CGCCGGGGCC ACATCGAGGA GGCGTTCGCG
CATCTGCGAC GTGCGGTGGA CCTCGACGAC ACGCTGCCCT ACGACGAGCC GTGGGGGTGG
ATGCAGCCCG CCCGGCACGC CCTGGGCGCC CTGCTGCTCG AGCAGGGCCG GGTGGACGAG
GCCGCCGCCG TGTACGCGGC GGACCTCGGC CTCGACGCGA CGCTCGGTCG CGCGTGCCGG
CACCCGCGCA ACGTGTGGAG CCTGCACGGC TACCACGAGT GCCTGAGCCG CATGGCCGGG
ACCGACCCCG ACCCCGACCG CGTCCAGGCC GCGACGGACG CCGGCCGGCA GCTCGCCCTG
GCCACCGCCC GGACGGACGT CCCGATCGAG GCGTCGTGCT TCTGCCGCAC CGGGACGTGA
|
|---|
| Protein sequence | MPTTPYPFDL GTHTRRTSTS SPEAAQWFDR GLVWSYAFHH EEAVRCFERA LRADPRFALA
HWGIAYAIGP NYNLAFDLYP PEDLPGMLAR AAAELARARE LADGAPEVER ALIEALSTRF
PTDPAADFAA YNRAYATAMA RAAALHPDDL DVIALHADAL LNVTPWKLWS VATGEPAEGA
STLEAKALLE DALARPGAMT HPGLLHLYVH LMEMSPTPEL ALPAADALRH LVPDAGHLLH
MPTHIDVLVG DYESVIAGNT AAIEADERWV AASAASGDEA PFYALYRAHD RHFRIYGAMF
AGRFEIARAT AEDLEESVAR ELVRDPGMAD FVEGFAGMRL HVLVRFGRWD ELTAHPLPAD
PDLYCVTTAL THYARGVAFA ALGRVAEAEG ERASFVAASA RVPESRYLFN NTCRDILAVA
SAMLDGEIAY RRGHIEEAFA HLRRAVDLDD TLPYDEPWGW MQPARHALGA LLLEQGRVDE
AAAVYAADLG LDATLGRACR HPRNVWSLHG YHECLSRMAG TDPDPDRVQA ATDAGRQLAL
ATARTDVPIE ASCFCRTGT
|
|---|
| |