Gene Bcav_0346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0346 
Symbol 
ID7859038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp370239 
End bp371576 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content71% 
IMG OID643864422 
Productglutamate dehydrogenase 
Protein accessionYP_002880372 
Protein GI229818846 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0334] Glutamate dehydrogenase/leucine dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCCG GCCTGAAGCA GATCTTCGAC GACGTGCTAC GTCGCAACCC CGGCGAGGCG 
GAGTTCCACC AGGCGGTCCG TGAGGTGTTC GACTCCCTCG GCCCCGTGCT GGCGAAGCAC
CCACGCTATG TCGACGCCGG TGTGCTCGAG CGGCTCTGCG AGCCCGAGCG ACAGATCATC
TTCCGGGTGC CGTGGGTCGA CGACGCCGGT GCCGTACACA TCAACCGCGG GTTCCGCGTG
GAGTTCAACT CGGCGCTCGG CCCGTTCAAG GGCGGGCTGC GGTTCCACCC GTCCGTGTAC
CTCGGGACGG TGAAGTTCCT CGGCTTCGAG CAGGTCTTCA AGAACTCGCT CACCGGGATG
CCGCTCGGCG GCGCGAAAGG CGGGTCCGAC TTCGACCCGC GAGGTCGCAC GGACGCCGAG
GTCATGCGGT TCTGCCAGTC GTTCATGACC GAGCTCTACC GGCACATCGG CGAGTACACC
GACGTGCCGG CGGGCGACAT CGGCGTCGGC GGCCGCGAGA TCGGCTACCT CTTCGGCCAG
TACAAGCGGA TCACGAACCG GTACGAGTCC GGCGTCCTCA CGGGCAAGGG CATCAGCTGG
GGCGGGTCGC TCGTGCGGAC GGAGGCCACC GGCTACGGCA CCGTGCTGTT CGCGGAGCGC
ATGCTCGCGA CGCGCGGCCG GTCGTTCGAC GGCGCCCGGG TGGCGGTCTC CGGGTCCGGC
AACGTCGCCG TGCACGCCAT CACGAAGGCG CAGTCGCTCG GCGCGCAGGT CGTGGCGTTC
TCGGACTCGT CCGGGTTCGT CGTCGACCCG AGCGGCGTGG ACGTCGAGCT CCTGCGGCGG
ATCAAGGAGG TCGACCGCGG CCGCGTCGCC GACTATGCGG ACGCGCGGCC CGACGCCCGG
TTCGTGTCCG ACGGCCGGAT CTGGGACGTA CCGGTCGACG TCGCCCTCCC CTGCGCCACC
CAGAACGAGC TCACGGGCGC CGACGCCGCA CGGCTCGTCG CGAACGGAGT CGTCGCCGTC
GCGGAGGGCG CCAACATGCC GACGACGCCG GACGCCGTCG CCGCCTTCGC GGCGGCCGGC
GTGCTCTTCG CGCCGGGCAA GGCCGCGAAC GCCGGTGGGG TCGCGACGTC CGCCCTGGAG
ATGCAGCAGA ACGCCTCGCG GGACGCGTGG ACGTTCGACT ACACCGAGGA GCGGCTCGCC
GCGATCATGG CGGCGATCCA CGACCGCTGC CTCGACACCG CGGAGGAGTA CGGCGCGCCG
GGGAGCTACG TGCTCGGGGC GAACATCGCC GGCTTCACGA AGGTCGCCGA CGCGATGATC
GCCCTCGGCG TCGTCTGA
 
Protein sequence
MDAGLKQIFD DVLRRNPGEA EFHQAVREVF DSLGPVLAKH PRYVDAGVLE RLCEPERQII 
FRVPWVDDAG AVHINRGFRV EFNSALGPFK GGLRFHPSVY LGTVKFLGFE QVFKNSLTGM
PLGGAKGGSD FDPRGRTDAE VMRFCQSFMT ELYRHIGEYT DVPAGDIGVG GREIGYLFGQ
YKRITNRYES GVLTGKGISW GGSLVRTEAT GYGTVLFAER MLATRGRSFD GARVAVSGSG
NVAVHAITKA QSLGAQVVAF SDSSGFVVDP SGVDVELLRR IKEVDRGRVA DYADARPDAR
FVSDGRIWDV PVDVALPCAT QNELTGADAA RLVANGVVAV AEGANMPTTP DAVAAFAAAG
VLFAPGKAAN AGGVATSALE MQQNASRDAW TFDYTEERLA AIMAAIHDRC LDTAEEYGAP
GSYVLGANIA GFTKVADAMI ALGVV