| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0338 |
|---|
| Symbol | |
|---|
| ID | 7859030 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 361777 |
|---|
| End bp | 362853 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643864414 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_002880364 |
|---|
| Protein GI | 229818838 |
|---|
| COG category | [S] Function unknown
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2120] Uncharacterized proteins, LmbE homologs
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.35024 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCCAGG ACCGGCCGCG AGCGCTCGTG CTGGAGGACG ACGCCGACGC CGCCGAGTTC
ACCCGGATCG CGCTGGAGCG GTTCGGTGGG ATGGACGTCG CCGTCGTGGG TACCGCCGGC
GACGCCCTCC GGCTGCTGCG GGAGCAGCAC TTCGACATCC TCGTCAGCGA CATCGAGCTG
CCGGGGCGCT CGGGCCTGGA GATCCTGCCC GAGGTCCGCA TGATCGACCC GACGCTGCCC
GTCATGGTCA TCACGGCGCA CGGCAGCGTG AGTCACGCCG TCGAGGCGCT CCGGAAGAGC
GCCGACGAGT TCCTCGTCAA GCCCGTGACG GCCATGCAGA TCGTGGAGCG GGCCACCGAG
CTCGTGCGGT CGGGACGGGA GCGCGATGCC GCAGGGCGCG AGGCGGTCCT CGCGATCGGC
GCGCATCCGG ACGACGTCGA GATCGGCGTC GGTGCGACTC TGGCGGCGCA TGCCGCGGCA
GGCGACCGTC TGACGATCCT GACGCTGTCC CCGGGCGCCG TCGGCGGCGA GGTGACCCTC
CGGCACGCGG AGGCGCTCGA GGCGGCGGCC GTCGTCGGGG CACGCCTGGT CCATCTCGCG
TTCCCGGACA CCCGGCTGGA TCCCGCCGAC GGTCTCATCA CGGCGATCGA GGAGGTTGTC
GCCGACGTGC GGCCGGACCG CGTCTACACG CACACGTCCC ACGACCGGCA CCAGGACCAC
CGCGCGGTGC ACGAGGCGGT GCAGGTCGCG GCGCGCCAGG TGCCGAGCCT GTGGTGCTAC
CAGAGCCCGT CGTCGACCGT GCAGTTCCAG CCCAACAGGT TCGTCGACGT CGACGGCTTC
GTGGAGACGA AGCTCCGGAT GCTCGCCGCG TACGCGTCGC AGGCACATCG TGACTACATG
GACCCCGGCC TGGTGCAGGC GACGGCGCGC TACTGGTCGC GGTTCAGTCC TGCCCTCGCG
GTCGAGCCGC TGGAGACGGT GCGGGCGAGC GAGTCGCTCG CCGCCGCCGC GCAGGCGGTT
CGGCCTGCCC TCGGGGACGT CGAGGTGGAG CACCTTCGCG GGGTCGACGA GTCGTGA
|
|---|
| Protein sequence | MTQDRPRALV LEDDADAAEF TRIALERFGG MDVAVVGTAG DALRLLREQH FDILVSDIEL
PGRSGLEILP EVRMIDPTLP VMVITAHGSV SHAVEALRKS ADEFLVKPVT AMQIVERATE
LVRSGRERDA AGREAVLAIG AHPDDVEIGV GATLAAHAAA GDRLTILTLS PGAVGGEVTL
RHAEALEAAA VVGARLVHLA FPDTRLDPAD GLITAIEEVV ADVRPDRVYT HTSHDRHQDH
RAVHEAVQVA ARQVPSLWCY QSPSSTVQFQ PNRFVDVDGF VETKLRMLAA YASQAHRDYM
DPGLVQATAR YWSRFSPALA VEPLETVRAS ESLAAAAQAV RPALGDVEVE HLRGVDES
|
|---|
| |