Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_0298 |
Symbol | |
ID | 7858990 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 319769 |
End bp | 320143 |
Gene Length | 375 bp |
Protein Length | 124 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643864375 |
Product | anti-sigma-factor antagonist |
Protein accession | YP_002880325 |
Protein GI | 229818799 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.224332 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATCT CCGACCTCGC CCACGGCGGG ATCACGCACA CCCGGAACGG CGGAGGAGTC GTCATCCGGA TCTGGGGCGA GGTGGATGCC GCGCTCCGCG ACGACGCGAG TGCCGCCATG GCGGCGGTCC TCGCCGATCC GGGACCGGTC GTCATCGACG CACGCGACGT CACGTTCATC GACTCGACCG GGCTCGCCTT CATCCTGCAG CTGCACAAGC ACGGTTCGGA GGAGAGCCGC GAGGTGGTGC TCCGCGACCC GGCGCCCCGG CTCACGGAGC TGCTCGAGCT GGCCGCCGTC GGCGATCTCG TCCGGGTCGA ACGCACGCCG GTCCCACCGA CCGAGCAGAC GTCTCAGTCG CTCTCCTCGC GCTGA
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Protein sequence | MTISDLAHGG ITHTRNGGGV VIRIWGEVDA ALRDDASAAM AAVLADPGPV VIDARDVTFI DSTGLAFILQ LHKHGSEESR EVVLRDPAPR LTELLELAAV GDLVRVERTP VPPTEQTSQS LSSR
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