Gene Bcav_0298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0298 
Symbol 
ID7858990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp319769 
End bp320143 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content71% 
IMG OID643864375 
Productanti-sigma-factor antagonist 
Protein accessionYP_002880325 
Protein GI229818799 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.224332 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCT CCGACCTCGC CCACGGCGGG ATCACGCACA CCCGGAACGG CGGAGGAGTC 
GTCATCCGGA TCTGGGGCGA GGTGGATGCC GCGCTCCGCG ACGACGCGAG TGCCGCCATG
GCGGCGGTCC TCGCCGATCC GGGACCGGTC GTCATCGACG CACGCGACGT CACGTTCATC
GACTCGACCG GGCTCGCCTT CATCCTGCAG CTGCACAAGC ACGGTTCGGA GGAGAGCCGC
GAGGTGGTGC TCCGCGACCC GGCGCCCCGG CTCACGGAGC TGCTCGAGCT GGCCGCCGTC
GGCGATCTCG TCCGGGTCGA ACGCACGCCG GTCCCACCGA CCGAGCAGAC GTCTCAGTCG
CTCTCCTCGC GCTGA
 
Protein sequence
MTISDLAHGG ITHTRNGGGV VIRIWGEVDA ALRDDASAAM AAVLADPGPV VIDARDVTFI 
DSTGLAFILQ LHKHGSEESR EVVLRDPAPR LTELLELAAV GDLVRVERTP VPPTEQTSQS
LSSR