Gene Bcav_0188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0188 
Symbol 
ID7862060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp199426 
End bp200721 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content73% 
IMG OID643864265 
Productoxidoreductase domain protein 
Protein accessionYP_002880215 
Protein GI229818689 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCAGCA TCGGGATCAG CGGGGCGGGG ATGTTCGCCG AGGCGTTCAT CCCGCTCTTC 
GCGCAGCATC CGCTCGTGGA GCGCGTCGTG CTCGCGGACC TCGTGCCCGA ACGGCTCGCC
GAGGTGGCGC AGCGGCACGG GCTGGTCGAG ACGGTGGGAT CGCACGCCGA GCTGTGCGCC
TCGGACGTCG ACGCCGTCGC GATCTTCGCG CAGCGCCACC TGCACGGACC CCTCACGCTC
GAGGCGCTCG ACGCCGGGAA GCACACGTAC TGCGCGGTGC CGATCGCGTC CTCGCTGGAC
GACGTCGGGC GGATCGTCAG CGCCGTCGAA CGGACCGGCC TGGTCTACGC GAGCGGCGAG
ACCTCCTACT ACTACCCGCA CACGATCTAC TGCCGGGACC GGTACGCGCG CGGCGACTTC
GGCGCGTTCG TGTACGCCGA GGGCAACTAC CTGCACGACA TGGCGCACGG CTTCTACGCC
GCGTTCCAGC ACTCGGGCGG CGAGCAGTGG CGCCGCGTGG CGGGCTACCC GCCGATGCTC
TACCCGACGC ACTCCACGGG TGCGGTGCTC GGCGTCACCG GCGCACGCGT CACCGACGTG
AGCTGCCTGG GCTACGCCGA CGTGGAGGAG GACGGCGTGT TCGGGGTCGG CGCGAACGAG
TGGGACAACC CGTACTCGAA CCAGACGGCC CTCATGCGGA CCGACGACGG CGGCATGCTC
CGCGTCAACG AGTTCCGCCG GATCGGCTGG CGCGGGACCC ACGGCGGGAA CCCGCTGACG
ATCTATGGCA CGCGGGCGTC GTTCGAGGAG AACGCCGGGA GCCAGGTGTG GGTCGATCGC
GACGGCGGGC CGACGGACGT GACGGGGCTG CTCGCGTGCG CGAAGCACGT GGAGGACACG
GCCGACGACG GCGCCGCGGG GGCCGCCGCA GCGGGCTCGC CCGGCGACGT CGCCGCCGAG
CACGCCGGGC TGCACGAGGT GCTGCGGGAG GACTTCTCGA GCCGCTACTC CGCTGTGCAC
CCGGTGCACC GGCTCCCCCA GGCCTACGCG CGGCTGCGCA ACGGGCACCT CGGCTCGCAC
CACTTCCTCG CCGACGACTT CGTGCGCGCC GTCGTGACGC GGACCGTGCC GCCGGTCAAC
GTGTGGGAGG CGGCGGCGTA CGCGGCGCCC GGGATCGTCG CGCACGCCTC GAGCCTCGCC
GGCGGCGACC GCCTGCCGGT GCCTGACTTC GGGCGCCCGC CCACCGACCG GCCCCTGCTC
GCCGTCGACG TGCCCGCCGA GGAGCTCGTC GGCTGA
 
Protein sequence
MISIGISGAG MFAEAFIPLF AQHPLVERVV LADLVPERLA EVAQRHGLVE TVGSHAELCA 
SDVDAVAIFA QRHLHGPLTL EALDAGKHTY CAVPIASSLD DVGRIVSAVE RTGLVYASGE
TSYYYPHTIY CRDRYARGDF GAFVYAEGNY LHDMAHGFYA AFQHSGGEQW RRVAGYPPML
YPTHSTGAVL GVTGARVTDV SCLGYADVEE DGVFGVGANE WDNPYSNQTA LMRTDDGGML
RVNEFRRIGW RGTHGGNPLT IYGTRASFEE NAGSQVWVDR DGGPTDVTGL LACAKHVEDT
ADDGAAGAAA AGSPGDVAAE HAGLHEVLRE DFSSRYSAVH PVHRLPQAYA RLRNGHLGSH
HFLADDFVRA VVTRTVPPVN VWEAAAYAAP GIVAHASSLA GGDRLPVPDF GRPPTDRPLL
AVDVPAEELV G