Gene Bcav_0161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0161 
Symbol 
ID7862033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp168356 
End bp169414 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content77% 
IMG OID643864238 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_002880188 
Protein GI229818662 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCC TGCTCGAGGT CCGCGACCTC GCCGTCACCC TGCCCGGGCC CGACGGCGAC 
CTCCCGGTGC TCCACGACGT GAGCCTGCAC GTCGATCCCG GCGAGATCGT CGGCATCGCC
GGCGAGAGCG GGTCCGGCAA GAGCATGACG GCGCAGACCC TGCTCGGCCT CCTCCCGCCC
GGGGCGCGCA CGAGCGGGTC CGCGCGGCTC GGCGACACCG AGCTGCTCGG GCTGCGGGGG
GCGCAGTGGA ACACGGTGCG CGGACGCCGC GTCGCGATGG TGTTCCAGGA CGCGACCGCG
GCGCTGCACC CCATGCTCAC CGTCGGCCGG CAGCTGACGG AGCACATGCA GGTGCACCTC
GGGCTGCGCC GTCGCGCGGC TGACGCCCGG GCTCGCGAGC TGCTCGAGCT CGTGCGCATC
CCCGACGCGC CGTCGGCGCT GCGCGCCTAC CCGCACCAGT TCTCCGGCGG GATGCGGCAG
CGGGTCGCGA TCGCCGTCGC GCTGGCGTGC GACCCGGAGC TCCTCGTCGC CGACGAGCCG
ACGACGGCGC TCGACGTCAC GGTGCAGGCG GGCATCCTCG AGCTGCTCGA CGACCTCCGC
CGCCAGGTCG GCCTCTCGGT CCTGTTCATC ACGCACGACC TCGGCGTGCT CGCGGCGCTG
ACCGCCCGGA CGTACGTGTT CTACGCGGGC CGGGTGATGG AGAGCGCCCC GACGGCCGAG
GTCACGCTCG CTCCGCGGCA CCCCTACACG GCGGCACTGC TGCGCGCCCG GCCGCACGCC
GACGCGTCGT GGGACCTCAC GGGGGCGCCC GCACCTGCTG CCGCGCAGCG CGCCGCCGCC
GGCCCGCCCC GGCCCGCCGG CCGCCGTCGG CTCGCGACCA TCCCCGGCAG CGCCGCCACC
CCGGCGTCGG CCCCGGCGGG CTGCCCGTTC GCGCCACGGT GCGCCTACCG CGAGGACCGG
TGCCAGGCGG CGATCCCGCC GCTCGACGCC GTCGCACCGG GTCACGACGT CGCGTGCGTG
GTCCGGCCGG ACCTGCGGGC AGTGGAGGTG GCCGGATGA
 
Protein sequence
MSALLEVRDL AVTLPGPDGD LPVLHDVSLH VDPGEIVGIA GESGSGKSMT AQTLLGLLPP 
GARTSGSARL GDTELLGLRG AQWNTVRGRR VAMVFQDATA ALHPMLTVGR QLTEHMQVHL
GLRRRAADAR ARELLELVRI PDAPSALRAY PHQFSGGMRQ RVAIAVALAC DPELLVADEP
TTALDVTVQA GILELLDDLR RQVGLSVLFI THDLGVLAAL TARTYVFYAG RVMESAPTAE
VTLAPRHPYT AALLRARPHA DASWDLTGAP APAAAQRAAA GPPRPAGRRR LATIPGSAAT
PASAPAGCPF APRCAYREDR CQAAIPPLDA VAPGHDVACV VRPDLRAVEV AG