Gene Bcav_0142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0142 
Symbol 
ID7859307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp148671 
End bp149735 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content76% 
IMG OID643864219 
Producttransport system permease protein 
Protein accessionYP_002880169 
Protein GI229818643 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGCCG ACGTCGCGAC GACGCCCCGG CCGCCTCGGC AGGCACCGCT CTCGCGGTCC 
GCCGGGGCGG TCCGGCGCTT CGGGCTCCTG GTGGCGGCGA GCCTCGCCGT GATCGCCGTC
GGCACGCTCC TCGGGCTCGC GATCGGCTCG CACCAGGTCG GGCTCCGGAC TGTCGTGGAA
GCGCTCGTCG CGTACGACCC GGGCGTCGAC GACCACCGGA TCGTCGTCCT GTCGCGCCTG
CCCCGCACCG TGCTGGCGCT CGTCGTCGGG CTCGCGCTCG GGATGGCTGG GACGCTCATG
CAGTCGGTCA CGCGCAACCC CCTCGCCGAC CCCGGACTGC TCGGCATCAA CGCCGGCGCC
TCGGCCGCCG TCGTGGTCGC CATCGCCTAC CTCGGCGTCA CCACCGTCCA GGGGTACGTG
TGGTTCGCGT TCGCAGGCGC CGCCGCTGCC GCCGTCGTCG TGTACGCCAT CGGCTCGGCG
CACCGCAGCG CCGCCACCCC CGTGCGGATG GCCCTCGCCG GGGCAGCCGT CTCGGTGGCC
GTCGCCGCCG TCACCAACGC GGTGCTGCTG AGCGACGAGC GGGCGTTCAA CTCGTTCCGG
TACTGGGCGG TCGGCTCGCT CCAGGGCCGC GGCCTCGACG TGACGACGGC GGTGCTGCCG
TTCGTCGTCG TCGGCCTGGC GATCGCGCTC CTGCTCGCCC GGCCGCTCAA CGCCGTCGCA
CTGGGCGACG ACGTGTCGCG AGCCGTCGGG GCGACGCCCG GTCTCGCGCG GCTCGGCTCC
GCGCTCGCCG TCGTCCTGCT CGCCGGTGCC GCGACGGCGG CCGCCGGGCC GATCGGGTTC
GTCGGGCTGG CGGCTCCGCA CATCGTGCGC GGCGTCGTCG GCCCGGACCA CCGCCTGCTC
CTGCCGGGCG TCCTCGTCGT CGCCCCGGCG TTCCTGCTGC TGGCCGACGT GCTCGGGCGT
GTCGCCGTCG CCCCGGGCGA GCTGCAGACC GGCATCGCCG TCGCGATCCT CGGCGGCCCC
TTGTTCGTCG CGCTCGTGCG CTCCCGCCGG GTGGCGGCCC TGTGA
 
Protein sequence
MTADVATTPR PPRQAPLSRS AGAVRRFGLL VAASLAVIAV GTLLGLAIGS HQVGLRTVVE 
ALVAYDPGVD DHRIVVLSRL PRTVLALVVG LALGMAGTLM QSVTRNPLAD PGLLGINAGA
SAAVVVAIAY LGVTTVQGYV WFAFAGAAAA AVVVYAIGSA HRSAATPVRM ALAGAAVSVA
VAAVTNAVLL SDERAFNSFR YWAVGSLQGR GLDVTTAVLP FVVVGLAIAL LLARPLNAVA
LGDDVSRAVG ATPGLARLGS ALAVVLLAGA ATAAAGPIGF VGLAAPHIVR GVVGPDHRLL
LPGVLVVAPA FLLLADVLGR VAVAPGELQT GIAVAILGGP LFVALVRSRR VAAL