Gene Bcav_0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0088 
Symbol 
ID7859253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp95721 
End bp96236 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content74% 
IMG OID643864165 
Productprotein of unknown function DUF437 
Protein accessionYP_002880115 
Protein GI229818589 
COG category[S] Function unknown 
COG ID[COG4405] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCACGG ATCGCACGCC CGCCGCCGCT CTCGACGTCG CGACGGCGAC GCGCATGTGG 
CAGGCGTACG CGGAGGCCCG ACCAGCCGCC GTCGCCGCCT GCCCGGAGTA CACGGTCGAG
CGGTTCGGCG ACTCGGCAGC GCTCGCGGAC GAGCTCCTGA GCTGGGTGCT CGGCGGCGGG
AAGCGGGCCA CGTCCGAGCT CGTCGCCGAG TTCGGCGCCC GTGGTGACGA CCTCCCGCGC
ATCGGCTCGC ACTGGATCGC GTGCGACGGC GCCGGGACGC CGCGGGTGAT CCTGCGGTCC
GTGGAGCTGC GGATCGGCAC GATGGACTCG GTCGACGAGG ACTTCGCCGT CGACGAGGGC
GACGGCACCC GCGAGATCTG GCTCGAGGAG CACAGCGCGT ACTGGACGCG GACGTGCGCG
GCGCGAGGCG CCGTGCTCAC CGGCGACGAC GAGGTCGTCT TCGAGCGTTT CCGCGTCGTC
TGGCCACCGG AGCACGCGGA CCCCGACCTC GCCTGA
 
Protein sequence
MGTDRTPAAA LDVATATRMW QAYAEARPAA VAACPEYTVE RFGDSAALAD ELLSWVLGGG 
KRATSELVAE FGARGDDLPR IGSHWIACDG AGTPRVILRS VELRIGTMDS VDEDFAVDEG
DGTREIWLEE HSAYWTRTCA ARGAVLTGDD EVVFERFRVV WPPEHADPDL A