Gene Bcav_0052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0052 
Symbol 
ID7858255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp54095 
End bp54730 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content73% 
IMG OID643864130 
Producthypothetical protein 
Protein accessionYP_002880080 
Protein GI229818554 
COG category[S] Function unknown 
COG ID[COG4832] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.889174 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGGCA AGAATGGGGA CGTGCCGTTC GACGTCAAGC GGGAGCTCCC CGCCCTCTAC 
GCCCCGAAGA ACCGCGCCTG GGACCTGCTC GACGTCCCGC CGCAGCAGTT CCTCGCGGTC
GACGGCGAGG GGGACCCGAA CACGTCGGAG GCGTACGCGC GCGCGGTCGA GGCGCTCTAC
GCCGTCGCGT ACACGCTCCG GTTCGCGAGC AAGCGGGACG GGTTCGAGTT CGTCGTCGGA
CCGCTCGAGG GCCTGTGGTG GTCGCCCGAC CCGGCCGTGT TCACCGCGCG GGCCAAGGAG
AAGTGGCACT GGCGGATGCT CATCACGCTG CCCGAGCGCC TCACCGGGGC GCAGGTGACG
CAGGCCGCCG CGGCCGCGCA GGCGAAGAAG GGACTGCCGG CGATCTCCGA CGTCCGGCTC
GAGCGGATGC ACGAGGGGCT GTGCGCGCAG GTGCTGCACC TCGGGTCGTA CGACGACGAG
ACACCCGTGC TCGCCGAGCT CCACGAGCGC TACCTGCCGC AGCTCGGCCT CGTCCCCACG
GGTCACCACC ACGAGATCTA CCTCGGCGAC CCGCGGCGGA CGGCGCCCGA GAAGCTGCGC
ACGGTGATCC GGCAGCCGGT CGCGCCGGCC CCGTAG
 
Protein sequence
MPGKNGDVPF DVKRELPALY APKNRAWDLL DVPPQQFLAV DGEGDPNTSE AYARAVEALY 
AVAYTLRFAS KRDGFEFVVG PLEGLWWSPD PAVFTARAKE KWHWRMLITL PERLTGAQVT
QAAAAAQAKK GLPAISDVRL ERMHEGLCAQ VLHLGSYDDE TPVLAELHER YLPQLGLVPT
GHHHEIYLGD PRRTAPEKLR TVIRQPVAPA P