7 homologs were found in PanDaTox collection
for query gene Bamb_6605 on replicon NC_008385
Organism: Burkholderia ambifaria AMMD



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007337  Reut_D6442  putative conjugation protein TraO  100 
 
 		 115 aa  237  5e-62  Ralstonia eutropha JMP134  Bacteria  normal  0.052249  n/a   
 
 
-
 
NC_008385  Bamb_6605  putative conjugation protein TraO  100 
 
 		 115 aa  237  5e-62  Burkholderia ambifaria AMMD  Bacteria  normal  1  n/a   
 
 
-
 
NC_008766  Ajs_4308  putative conjugation protein TraO  87.72 
 
 		 115 aa  209  1e-53  Acidovorax sp. JS42  Bacteria  normal  0.992257  normal  1 
 
 
-
 
NC_010579  XfasM23_2255  putative conjugation protein TraO  55.17 
 
 		 117 aa  124  3e-28  Xylella fastidiosa M23  Bacteria  normal  1  n/a   
 
 
-
 
NC_011092  SeSA_B0074  TraB protein  35.37 
 
 		 139 aa  50.8  0.000007  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  1  normal  0.478776 
 
 
-
 
NC_010509  Mrad2831_6337  hypothetical protein  31.19 
 
 		 154 aa  48.9  0.00002  Methylobacterium radiotolerans JCM 2831  Bacteria  n/a    normal  0.674088 
 
 
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NC_010679  Bphyt_7354  hypothetical protein  32.86 
 
 		 393 aa  43.1  0.001  Burkholderia phytofirmans PsJN  Bacteria  decreased coverage  0.00000618137  normal  0.312586 
 
 
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