Gene Bamb_6582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6582 
Symbol 
ID4315486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp1272947 
End bp1273972 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content67% 
IMG OID638154426 
Productoxidoreductase FAD/NAD(P)-binding subunit 
Protein accessionYP_778460 
Protein GI115361323 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
[COG0633] Ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.10458 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.992183 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACCT ACAAGATTGC ACTGAACTTC GAGGACGGGG TCACCCGCTT CATCGACTGC 
AAGGCCGGCG AGAAGGTGCT CGACGCCGCG TTTCGCGCGA AGATCAACCT GCCGATGGAC
TGCTCCGACG GCGTGTGCGG CACCTGCAAG TGCCGCGCGG AAAGCGGCAG CTACGACCTC
GGCGACGACT ACATCGACGA CGCGCTCACC GAGGACGAGA AGGACGGCGG CCTCGTGCTG
ACCTGCCAGA TGGTGCCGCA AAGCGATTGC GTGATCGCGG TGCCAACCTC GTCGGTCGCG
TGCAAGACCG GCCACAGCGC GTTTGCCGCG ACCGTGACGC GGGTCGAGCC GCACAACGAC
GCGGCGATCG TGCTCGAGCT CGACGTCGAC GCGGCCGCGC CGGCGTTCCT GCCCGGCCAG
TACGTGAACA TCGGCGTGCC GGGCAGCGGC CAGCACCGGT CCTATTCGTT CTCGTCCGCG
CCGGGTGACA CGAAGATCGG ATTCCTGATC AAGAAGATTC CCGGCGGCGT GATGAGCACG
TGGCTCGAAT CGGCGGCGCC CGGCGACACG CTCGAGCTGA CCGGGCCGCT CGGCAGCTTC
TACCTGCGCG ACGTCGCGCG GCCGCTGCTG TTCCTCGCGG GCGGCACGGG CCTCGCGCCG
TTCCTGTCGA TGCTGGAGGC GCTCGCGCGC AGCGGCTCGC AGCAGAAGGT GCACCTGATC
TACGGCGTGA CGCGCGATCT CGACCTGGTG CTGGTCGACG CGATCGAAGC GTATGCGGCG
AAGCTGCCGA ACTTCAGCTT CGCGACCGTC GTCGCCGATG CGGCGTCGAG CCATGCGCGC
AAGGGCTGGG TCACGCAGCA CATTCCGGCC GACGCGCTGA ACGACGGCGA CGTGGACGTC
TATCTGTGCG GGCCGCCGCC GATGGTCGAT GCGGTGCGCC AGTACTTCGA CGATCAGGGC
GTGAAGCCCA ACAGCTTCCA CTACGAGAAG TTCACGCCGA ACGTGACGAC GGCAAAGGCG
GCATGA
 
Protein sequence
MSTYKIALNF EDGVTRFIDC KAGEKVLDAA FRAKINLPMD CSDGVCGTCK CRAESGSYDL 
GDDYIDDALT EDEKDGGLVL TCQMVPQSDC VIAVPTSSVA CKTGHSAFAA TVTRVEPHND
AAIVLELDVD AAAPAFLPGQ YVNIGVPGSG QHRSYSFSSA PGDTKIGFLI KKIPGGVMST
WLESAAPGDT LELTGPLGSF YLRDVARPLL FLAGGTGLAP FLSMLEALAR SGSQQKVHLI
YGVTRDLDLV LVDAIEAYAA KLPNFSFATV VADAASSHAR KGWVTQHIPA DALNDGDVDV
YLCGPPPMVD AVRQYFDDQG VKPNSFHYEK FTPNVTTAKA A