Gene Bamb_6554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6554 
Symbol 
ID4315458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp1239664 
End bp1240020 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content64% 
IMG OID638154398 
Productalkylphosphonate utilization operon protein PhnA 
Protein accessionYP_778432 
Protein GI115361295 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2824] Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism 
TIGRFAM ID[TIGR00686] alkylphosphonate utilization operon protein PhnA 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCTG CAATGAACGC CGCCCCCGCC TGCCCGCAAT GCGCGATGGA AAACACCTAC 
CCGGACGGCA CGCTGACCGT GTGCGCGGAC TGCGGATATG AATGGTCGGC CGGTGCCGGC
GCGGACGCCG GCGACGAACC GGCCGGCGAC GTCGTCAAGG ACGCGAACGG CAACGTGCTG
TCGGACGGCG ATTCGGTCGT GCTGATCAAG GACTTGCGCG TGAAGGGCTC GTCGATCACG
TTGAAGATGG GCACCAAGGT CAAGAGCATC CGGCTCGTCG GCGGCGATCA CGAAGTCGAT
TGCAAGACCG ACATGGGCGG CTTCATGCTG AAGGCGTGCT ACCTGAAGAA GGTCTGA
 
Protein sequence
MEAAMNAAPA CPQCAMENTY PDGTLTVCAD CGYEWSAGAG ADAGDEPAGD VVKDANGNVL 
SDGDSVVLIK DLRVKGSSIT LKMGTKVKSI RLVGGDHEVD CKTDMGGFML KACYLKKV