Gene Bamb_6504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6504 
Symbol 
ID4315408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp1189143 
End bp1189652 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content59% 
IMG OID638154348 
ProductAsnC family transcriptional regulator 
Protein accessionYP_778382 
Protein GI115361245 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0845269 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.499109 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTTG CGCTGGACAG GATAGACCTT AGCATCCTGA GTGAACTTCA GGAGGACTCA 
AGTTTGACGA ATCTCGAACT GGCGGCTCGC GTCAACCTGT CGCCCTCTCC CTGTCTCGTC
AGAGTCAGAA ATCTGGAGCG TCTCGGTGTA ATCAGCCGGC GCGTCGCCGT GCTCAATGCG
TCCCTTCTCG GCCTGGGCAT CATGGCCATC GTCGAGATCA GTCTGGAGCG GCAGGGCATG
CAGGCGCGGG AGAGTTTCGC CGACACGGTC AGAGGCATCA CCGAAGTCAT GGACTGCTTC
ATGATGACCG GGCAAACCGA CTATCTGCTG CGCGTGGTGG CGAGGGATCT CGTCGAACTC
GAACACATCA TCACACACAA GCTGACGTCG CTTCCCGGTG TGGCCAGCGT TCGCTCGAAC
GTCGTCCTGA AACGGCTTGC CAACAAGACG ACGCTTCCTA TCGACAAGAC ACGGCCTATC
CAGATTCATG GACTGGCGCA GGCGTCGTGA
 
Protein sequence
MNVALDRIDL SILSELQEDS SLTNLELAAR VNLSPSPCLV RVRNLERLGV ISRRVAVLNA 
SLLGLGIMAI VEISLERQGM QARESFADTV RGITEVMDCF MMTGQTDYLL RVVARDLVEL
EHIITHKLTS LPGVASVRSN VVLKRLANKT TLPIDKTRPI QIHGLAQAS