| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6414 |
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| Symbol | |
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| ID | 4315318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 1039661 |
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| End bp | 1041370 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638154258 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_778292 |
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| Protein GI | 115361155 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.981458 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGAGCG GAATCGACCA TCACGGAGAC GCGGTTGAAG AGTTTGATTA CATCATCGTC
GGCGCGGGTT CGGCCGGTTG TACGCTAGCG GCTCGGTTAA GCGAGGATGC CAGTGTTTCC
GTGCTTCTGC TCGAGGCCGG CGGGCGAGAC AAAAATATCT GGATTCATAT CCCGGTCGGG
TATATCAAGA CGCTGGATAT GCCGCGGCTC AACTGGAGAT TCTGGTCCGA ACCGGATCCG
TACACTTACA ATCGACCGAT TTCGATTCCG CGCGGCCGTG TGCTCGGTGG GACGAGCTCT
ATCAATGCGA TGCTTTATGT GCGCGGCGAG AGGCAAGACT ACGACGGTTG GGTTGCGCTT
GGGAACCGCG GCTGGTCGTG GGACGAGGTT CTGCCGTACT TCTGCAAAGC GGAGAACTGG
GAGGGTACGC CGGCGCCGTG GCGCGGAAGA GGCGGGCCTT TGAATACCAG GGATCTCTAC
GAGCATGGTG AAGTTCCCGA TGCGATCATT GCCGCCGCAG CGCAGTGTGG TTATCCGATC
AATCCGGATT ACAACTCGGG TGACACGGAA GGGTTCGGAT ACTTTCAGGT TACGCAAAAA
AATGGCCGTC GCTGGTCGAC GAGCCGGGCG TATTTGCGGC CGGTGATGGG GCGTCCGAAT
CTCAAGGTTG AAACTGAAGC ACACGCAACG TCGGTCACGT TAGCGGGAAA ACGCGCAACG
GGTGTTACCT TTGTGCAACG AGGGCGAGCT CGTGCCGTCA AGGCTCGTCG AGAGGTGATA
TTGGCGGCTG GCGCGGTGCA GTCGCCGCAG CTTCTGGAGC TCTCCGGCAT CGGGAACCCC
GAAATTTTGC GAGCTCACGG GATACCGGTG CGTCACGCGT TGCCTGGGGT GGGCGAGAAT
TACCAGGACC ACTTCATCGT GCGCATGTCC TGGCGGGTAA CCAGGCCAAT TACGGTTAAC
GAGAAGGTGC ATGGTCTGAA CCTCGCTAAA GAGGTCGTCA AGTATGCGTT CAAGCGACGC
GGTGTGCTGA CGTTCGCAGC AGGGGTGGTG TGCGGTTATG TGCGTACCAA GCCGGACGTT
GCGACGCCGG ACATCCAATA TACGATTGCT GATGCGACAT TCAAGGATCC CGTGAAGCGG
GTTTTGGACC CGGAGCCGGG CATGACCATT GGCCCGTCTC CGTTGCGTCC GGTCAGTCGC
GGGTCGATAC ACATTGCGTC GGCGGATCCG ATGGCTGCGC CCAAAATATG TCCGAATTTC
CTGCATGCGG AAAGCGATCG CGTGACGCTG GTGGATGGCA TGAAGATCGC GCGGCAAATT
GCTTCTGCAC CTGCACTTTC ATCGTATATC TCGCACGAAG TGGGGCCCGG GTCCTCGGCT
GGCAGTGACG ATGAGCTGCT CGATTTTGCC AGGCGAACCG GGGCCACGAT TCATCACCCT
GTCGGAACGG CGAAGATGGG GAGCGACGAG ATGGCGGTGG TCGACGAGCG ACTTCGGGTG
CGTGGTATCG ACGGATTGCG TGTAGTCGAC GCATCCGTTA TGCCGACAAT CGTGTCAGGC
AATACAAACG CTCCAGTCAT CATGATTGCC GAGAAGGCAT CGGACATGAT CAAGCAGGAC
GCGAAAAATA ACACCGGCGG AAGCAGCAAG ATATCGATCA GTCGAGAACC ACTTTCGCGC
GATTCAGAAT CTTCCTCGCC CGTTCGATAA
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| Protein sequence | MESGIDHHGD AVEEFDYIIV GAGSAGCTLA ARLSEDASVS VLLLEAGGRD KNIWIHIPVG
YIKTLDMPRL NWRFWSEPDP YTYNRPISIP RGRVLGGTSS INAMLYVRGE RQDYDGWVAL
GNRGWSWDEV LPYFCKAENW EGTPAPWRGR GGPLNTRDLY EHGEVPDAII AAAAQCGYPI
NPDYNSGDTE GFGYFQVTQK NGRRWSTSRA YLRPVMGRPN LKVETEAHAT SVTLAGKRAT
GVTFVQRGRA RAVKARREVI LAAGAVQSPQ LLELSGIGNP EILRAHGIPV RHALPGVGEN
YQDHFIVRMS WRVTRPITVN EKVHGLNLAK EVVKYAFKRR GVLTFAAGVV CGYVRTKPDV
ATPDIQYTIA DATFKDPVKR VLDPEPGMTI GPSPLRPVSR GSIHIASADP MAAPKICPNF
LHAESDRVTL VDGMKIARQI ASAPALSSYI SHEVGPGSSA GSDDELLDFA RRTGATIHHP
VGTAKMGSDE MAVVDERLRV RGIDGLRVVD ASVMPTIVSG NTNAPVIMIA EKASDMIKQD
AKNNTGGSSK ISISREPLSR DSESSSPVR
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