| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6364 |
|---|
| Symbol | |
|---|
| ID | 4315268 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008392 |
|---|
| Strand | + |
|---|
| Start bp | 974947 |
|---|
| End bp | 976134 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638154208 |
|---|
| Product | amidohydrolase |
|---|
| Protein accession | YP_778242 |
|---|
| Protein GI | 115361105 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
|---|
| TIGRFAM ID | [TIGR01891] amidohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.557183 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGAAAATC CCGTCATTCC CGACACGTCG CTGCAAGCGC ATCACGCGCA CTGGGCGAAG
CTGCGCCGCG ACCTGCATGC GCATCCCGAA CTGCGATTCG AAGAACACCG GACGGCCGAC
GTCGTCGCCC GCGAGCTTGA AGCGCTCGGC TATGCGGTGT CGCGCGGGCT CGGCGGTACA
GGCGTCGTGG CCAGCCTGCC CGGCGCGGAT CCGGGCCGCG GCATCGTCCT GCGCGCCGAT
CTCGATGCGT TGCCGATCCA CGAAGCCAAC GATTTCGCGC ATGCGTCGTG CACGCACGGG
ATCATGCATG CGTGCGGCCA TGACGGTCAT ACCGTGATGT TGCTCGGCGC CGCGCGCGTG
CTGAAAGCGT TGCCGCAGCT GCCGGGCACC GTCCATTTCG TGTTTCAGCC GGGCGAAGAA
GGCGGCGCGG GCGCGCGCAA GATGATCGAC GATGGGCTGT TCGAGCAATG CCCGACGGAG
GCGGTATTCG GCATGCACAA CTGGCCCGGT TTGCCGGCCG GGCATTTCGG GTTGCGCACC
GGCCCGATCA TGGCCGCCGG CTCGCGGTTC AGGATCACGA TCACCGGCAA GGGCGCGCAT
GCGGCGCAGC CGCACCTCGG CATCGATCCC GTTCCGCTCG CGTGCTCGAT GGTGCTGCAG
TGCCAGACGA TCGCCGCGCG GCACAAGGAT CCCGTTGACC CGGCGGTGAT TTCCGTCTGC
ATGTTCCATG CGGGCACGAC GGACAACGTC ATTCCGGACA CGGCCGAGCT GCGCGGCACG
ATCCGCACGC TGTCGTCCGC GTTGCAGCAA CAGTTGCAGC GCGACGTCCG GCTCATGTGC
GAAGGGCTGG CGGCGGCTTA TGGCGCGCAG GTCGACGTCG AATTCTTTCA GTACTACCCG
GCAACGGTCA ACACGCCGAC CGAGACGGCG CTGTGCGAAG CGGTGATTCG CGACACGTTC
GGCGACGAAC GCCTGTACCC CGACGTACCG CCGAACATGA CGTCCGAAGA CTTCGGCTTC
ATGCTGGAGG AGCGCCCCGG CGCGTACGTG CTGATCGGCA ATGCGCCGGT CGGATCGACG
TCGCCGGCGT TGCATCACCC GAAATACGAT TTCAACGACG ACATCATTCC GGCTGGCGTT
CGGTACTGGG GGGCACTCGC ACGGGAGTAT TTCGCGCGAT TTCCGTGA
|
|---|
| Protein sequence | MENPVIPDTS LQAHHAHWAK LRRDLHAHPE LRFEEHRTAD VVARELEALG YAVSRGLGGT
GVVASLPGAD PGRGIVLRAD LDALPIHEAN DFAHASCTHG IMHACGHDGH TVMLLGAARV
LKALPQLPGT VHFVFQPGEE GGAGARKMID DGLFEQCPTE AVFGMHNWPG LPAGHFGLRT
GPIMAAGSRF RITITGKGAH AAQPHLGIDP VPLACSMVLQ CQTIAARHKD PVDPAVISVC
MFHAGTTDNV IPDTAELRGT IRTLSSALQQ QLQRDVRLMC EGLAAAYGAQ VDVEFFQYYP
ATVNTPTETA LCEAVIRDTF GDERLYPDVP PNMTSEDFGF MLEERPGAYV LIGNAPVGST
SPALHHPKYD FNDDIIPAGV RYWGALAREY FARFP
|
|---|
| |