| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6349 |
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| Symbol | |
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| ID | 4315253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 957022 |
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| End bp | 957948 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638154193 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
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| Protein accession | YP_778227 |
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| Protein GI | 115361090 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTTCC TGTACAAAGC CGACCCGGTG CGCGGCGCGC AATGGGCACA ACGCTTCGCG
CAACGCGCGC CCGACCTCCC GTTCCGGATC TGGCCGGATC TCGGCGATCC GCACGACGTG
CGCTACCTCG CCGCGTGGCA ACCGCCGGAC GACCCGGTCG CGCTGCTGCC CAACCTCGAG
GTCGTGTTCT CGGTCGGCGC CGGCATCGAT CAGTTCGACC TGTCACGCGT GCCGACACAC
ATTCCGGTCG TGCGGATGAT CGAGCCGGGC ATCGTCGAAG GGATGGTCGA ATACGTGACG
CAGGCGGTGC TGACGATCCA CCGCGACCTG TTCGACTATG CGGCGCAACA GCGCGTGCAG
GCATGGTGCG AGAAGCCGGT GCGCGCGGCC GCGTCGCGGC GCGTCGGCGT GCTCGGGCTC
GGCACGCTCG GCCAGGCCGT GCTCGACGCG CTGCGGCGCT TCGGTTTCCC GTGCGCCGGC
TGGAGCCGCA CGCCGCGCAC GCTCGACGGC ATCGACTGCT ATGCGGGCGA CGCGGCGCTC
GACGCGTTCC TGGCCCGCAC CGACATCCTG ATCTGCCTGC TGCCGCTCAC CGACAGCACG
CGCGGCCTGC TCGGCGCACG CGTGTTCGAT GCGCTGCCGG CCGGCGCGTC GCTCGTGCAG
GTCGGGCGCG GCCCGCAGCT CGATGCGGCG GCGCTGCTCG CCGCGCTCGA CAGCGGCCGG
CTCGACAGCG CGATCCTCGA CGTGACGGAG CCCGAACCGT TGCCGGCCGG CCACCCGTTC
TGGACGCATC CGCGCATTCG CATCACGCCG CACATCGCGA GCGCGACGCG GCCCGACACC
GCGGTCGACG CGGTGCTCGA GAACCTCGCG CGCCATCGCG CGGGACAGCC GATGATCGGC
ATCGTCGATC GCGCGCGCGG CTACTGA
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| Protein sequence | MSFLYKADPV RGAQWAQRFA QRAPDLPFRI WPDLGDPHDV RYLAAWQPPD DPVALLPNLE
VVFSVGAGID QFDLSRVPTH IPVVRMIEPG IVEGMVEYVT QAVLTIHRDL FDYAAQQRVQ
AWCEKPVRAA ASRRVGVLGL GTLGQAVLDA LRRFGFPCAG WSRTPRTLDG IDCYAGDAAL
DAFLARTDIL ICLLPLTDST RGLLGARVFD ALPAGASLVQ VGRGPQLDAA ALLAALDSGR
LDSAILDVTE PEPLPAGHPF WTHPRIRITP HIASATRPDT AVDAVLENLA RHRAGQPMIG
IVDRARGY
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