Gene Bamb_6326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6326 
Symbol 
ID4315230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp928762 
End bp929613 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content67% 
IMG OID638154170 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_778204 
Protein GI115361067 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCCGA TGCCCATGTC CCGCTGGGGA CGTCCCGCCC GCTTGCTGTA CCGGCTGTCG 
CTGCCGTGCG CGCTCGCGCT GTGGCTCGTG CCCCTGCTCG CGGTGCTCGT CACGTCGATC
CGCTCGACCG ACGAGATCAT GGCCGGTCAT TACTGGGACT GGCCGAAGCA GTTCGCGCTG
GTCGAGAACT ACGGCGCCGC GCTCACGCAG ACGCCGATGC TGCATTACTT CGCGAACAGC
ATCCTGATCA CGGTGCCGTC GGTCGCCGCG TCGATCCTGC TCGCGTCGCT CGCCGGGCAC
GCGCTCGCGA ACTACCGGTT CCGCGGCAAT CTCGTGCTGC TCGGGCTGTT CGTCGCGGGC
AACTTCGTGC CGATCCAGAT CCTGATGATC CCGGTGCGGC AGATCATGCT CGGCGTCGGC
CTGTACAACA CCGTATGGGC GCTGGTGCTG TTCCATACCG CGTTCCAGAC CGGCTTCTGC
ACGCTGTTCC TGCGCAACTT CATCCGCGAG CTGCCGTTCG AGCTGATCGA GGCCGCGCGC
GTCGAAGGCG CGTCCGAGTG GGCGATCTAC TGGCGCGTCG TGCTGCCGCT CGTGCGGCCG
GCGCTCGCCG CGCTCGCGAT CCTCGTGTTC ACGTTCGTGT GGAACGACTA CTTCTGGGCG
CTGTGCCTCA CGCAAGGCGA CGACGCGGCG CCGATCACCG TCGGCGTCGC CGCGCTCAAG
GGGCAGTGGA CGACCGCCTG GAACATCGTG TCGGCCGGCT CGGTGCTCGC CGCGCTACCG
TCGGTGCTGA TGTTCTTCGC GATGCAGAAG CACTTCGTCG CGGGGCTCAC GTTCGGCGCG
ACGAAAGGCT GA
 
Protein sequence
MYPMPMSRWG RPARLLYRLS LPCALALWLV PLLAVLVTSI RSTDEIMAGH YWDWPKQFAL 
VENYGAALTQ TPMLHYFANS ILITVPSVAA SILLASLAGH ALANYRFRGN LVLLGLFVAG
NFVPIQILMI PVRQIMLGVG LYNTVWALVL FHTAFQTGFC TLFLRNFIRE LPFELIEAAR
VEGASEWAIY WRVVLPLVRP ALAALAILVF TFVWNDYFWA LCLTQGDDAA PITVGVAALK
GQWTTAWNIV SAGSVLAALP SVLMFFAMQK HFVAGLTFGA TKG