| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6304 |
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| Symbol | |
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| ID | 4315208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | - |
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| Start bp | 901091 |
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| End bp | 902353 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638154148 |
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| Product | Serine-type D-Ala-D-Ala carboxypeptidase |
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| Protein accession | YP_778182 |
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| Protein GI | 115361045 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.397924 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.258712 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACTT CTGCTCCTCC CCGGCTTTTC CCGCGCGCCG CCAAGCGGCT GATGCGTCGC
GTGGCGGCGA TTGCACCGGC GCTGGCCGTC AGCATCGCGG TTTCCTCCTG CGGCGGCGAC
AGCTCGGTGA GCTCTGGCGA ACCCGCCTTC GCAACCGAGG CGCGCCCGCA GATCGACGCA
TTGCTCGCGG ATACGATGAC GCCCGGCGCC GTCGTCTATG TGCAATCGCC ACACGGCAAC
TGGCTCGCGT CGTTCGGCAC GGCCGTGCGC GGCACGAATA CGCCGATCCC GACGAACGCG
CACTTCCGCG TCGGCAGCGT GACGAAGACG TGGACGGGCA CGGTGATCCT GCAACTCGTT
CAGGAAGGCA GGCTGCACCT GACCGATCAC GTCAGCCAGT ACGTCGCCAA CGTGCCGAAC
GGCGACTCGA TCACGATCGA GCAGTTGCTG ACCATGCGCA GCGGCCTCTA CAACTACTCG
ACGAATCTCG CGTTCAACCA GACGCTGGAT GCGCAACCGA ACAAGGTGTG GACCACCGAT
GAGCTGTTGG GCATCGCGCA GAGCCAGCCC GTCTATTTCG CGCCGGGCGC GGATTTCCGC
TACTCGAACA CGAACACCGT GCTGCTCGGC CTGATCATCC AGCAGCTCAC CGGCATGAGC
GCCGCCGATG CGATCCGGAC GCGGCTGTTC GCGCCGCTCG GCCTGACCGA AACCGCCCTG
CCGCCGCAGG ACAACACGGC GCTGCGGGCG CCGTCGCCGC AGGGCTATCA ATGGGGCACC
AATACCGAGA CGATCGACAG CGACGCGCTG TCCCCGGCAC GCCAGGCGGC CGCGAAAAAC
GGCACGCTGC AGCCCGCCAA CGTGACGACC GTCAATACGT CGTGGGCATG GACGGCCGGC
TCCGGCATCT CGACCGCGAC CGAACTGGGT GCGTACGTGC AGCGCATGGT CGGCGGCGGC
TACCTGAACG CCGACCTGCA GGCGCAACGG CTCGCGAGCT GCACGCCGAT CGATCCGTCG
AATCCCGCAT CGGCCAGCTA CTGCATGGGG CTCGCGAAGT TCGGTACGTT CTACGGACAC
ACCGGTGAAA TACCGGGCTT CAATACATTC GCCGGCTACG ACCCGGCGAC GAAGACGACG
ATCGTCACGT GGGCGAACAC GGGGGCCGGC CCCGACGGAC GCGCACCGGC CAACGAGATC
GCGCGCATCA TCATGGCCGA GCTCAGCAAG GCGTCGGACG TGCCGAGCGA GGGGCGGCCG
TGA
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| Protein sequence | MTTSAPPRLF PRAAKRLMRR VAAIAPALAV SIAVSSCGGD SSVSSGEPAF ATEARPQIDA
LLADTMTPGA VVYVQSPHGN WLASFGTAVR GTNTPIPTNA HFRVGSVTKT WTGTVILQLV
QEGRLHLTDH VSQYVANVPN GDSITIEQLL TMRSGLYNYS TNLAFNQTLD AQPNKVWTTD
ELLGIAQSQP VYFAPGADFR YSNTNTVLLG LIIQQLTGMS AADAIRTRLF APLGLTETAL
PPQDNTALRA PSPQGYQWGT NTETIDSDAL SPARQAAAKN GTLQPANVTT VNTSWAWTAG
SGISTATELG AYVQRMVGGG YLNADLQAQR LASCTPIDPS NPASASYCMG LAKFGTFYGH
TGEIPGFNTF AGYDPATKTT IVTWANTGAG PDGRAPANEI ARIIMAELSK ASDVPSEGRP
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