| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6236 |
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| Symbol | |
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| ID | 4315140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008392 |
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| Strand | + |
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| Start bp | 816309 |
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| End bp | 817487 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638154080 |
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| Product | Rieske (2Fe-2S) domain-containing protein |
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| Protein accession | YP_778114 |
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| Protein GI | 115360977 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.6562 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.612429 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCATG AAACCCAGGT GACGCTTGCT AAACGCATCT TCGCGTTGAT CGATTCCGGC
GGCACGGACA TGAGCGACGC GTGCGCGAGC AATCCTGTAT CCGCATACAG CTGTCCGGCA
ATCCTGAAGC AGGAGCGACA GCGCTTGTTC ACCGGCCGAC CGGTGCTGAT CGCGACGAGC
TGCCAGCTCA AGGCGCCCGG CGATTATCTG ACCGACGATC GATGCGGCGT GCCGATCCTG
CTCGTGCGCA ATCGCGACGG GAAGCTCAAC GCGTTCGCCA ACGTCTGCCG TCACCGTGGC
GCGCGGCTCG CGAATGGCTG CGGCCGCGAC ACGACATCGT TCGTTTGCCC GTATCACGGC
TGGGGCTACA ACCTGGAAGG GAAATTGCGC ATCCTGTCGC CGCGCGGCGC GTTCCCCGGC
CTCGACTGCG AGCATACCGA CCTCGTTCGT TTTCCCGTCG CGGAGCGGCA TGGGCTCATT
TGGGTGTTGC CGCAGGCCGG CGGCACCATC AACGAAGATG CGCTGCTGCC GGGGCTGGAC
AGCGAGCTGG CTTCATACGG TCTCGCCAAC TTCACGCACT TCGGGACGCG AGCGCTGCGC
AAACGGCTCA ACTGGAAGCT GGCCATCGAT ACGTTTCTCG AAAGCTGGCA TATCGACAAG
CTGCATCGGG AAACCATCAA TCCGATCTTC CTGCCGGGCA TCGGCCTCGT CGATACATTC
GGCGACAACA TGCGCCTCAC GTTTCCGCGC CGCTCGATCG TCGACATGCG CAATCAGCCG
GAGGAGAACT GGGATCTGCT GCGCCATACG CTCATCGTCT ACGTATTGTT TCCGAATACG
CTGTTGAACT GGCAGGGCCG ACACTTCGAG ATCTGGCGCA TGTTTCCCGC CAACGACGAG
GATCCCGATC AGTGCATCGC CGAGGCTTCG CTTTACACGC CCACACCCGT CGGCAATGCC
CAGACCGACG CGTACTGGCG GCGCAATTTC GATCTGCTGA TGAACGTCGT GGAGAAGGAA
GACTTCGATC TCGCGGAACA GATTCAGCGC GGTTTCAACG CACGCACGCA ACAGAGCATC
ACGTTCGGGC GGCATGAACC GGCGTTGGGC TATTACCACG AGCGGCTGCG ACGGGCAGTC
GCGGCGGATC GGGAGGAGAA GGAGGAGGCC GCGGCCTAG
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| Protein sequence | MQHETQVTLA KRIFALIDSG GTDMSDACAS NPVSAYSCPA ILKQERQRLF TGRPVLIATS
CQLKAPGDYL TDDRCGVPIL LVRNRDGKLN AFANVCRHRG ARLANGCGRD TTSFVCPYHG
WGYNLEGKLR ILSPRGAFPG LDCEHTDLVR FPVAERHGLI WVLPQAGGTI NEDALLPGLD
SELASYGLAN FTHFGTRALR KRLNWKLAID TFLESWHIDK LHRETINPIF LPGIGLVDTF
GDNMRLTFPR RSIVDMRNQP EENWDLLRHT LIVYVLFPNT LLNWQGRHFE IWRMFPANDE
DPDQCIAEAS LYTPTPVGNA QTDAYWRRNF DLLMNVVEKE DFDLAEQIQR GFNARTQQSI
TFGRHEPALG YYHERLRRAV AADREEKEEA AA
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