Gene Bamb_6213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6213 
Symbol 
ID4315117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp783577 
End bp783918 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content62% 
IMG OID638154057 
Productsmall integral membrane protein 
Protein accessionYP_778091 
Protein GI115360954 
COG category[S] Function unknown 
COG ID[COG5605] Predicted small integral membrane protein 
TIGRFAM ID[TIGR02229] caa(3)-type oxidase, subunit IV 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCACA CCGATTCCGC CGATCGACCC GACGCCGCGC ACGGCCAGCA GCATCCGATC 
GGCGTCTACC TGAAGATCTG GGGCCTGCTG TTCGTTCTGA GCACGTTGTC GTATCTGGTG
GACTACTTCC ACGTGCAGGG CGTGCTGCGC TGGGTGCTGA TCGTCGTGCT GATGATCGCG
AAGGCCGGGC TGATCGTGTC GATCTTCATG CACATGATGT GGGAGCGGCT GGCGCTCGTG
TACGCGATCC TGGTACCACC GCTATGCCTG CTGGTGCTCA TGGTGCTGAT GGCCGCCGAA
GCGCATCACA CGTTCGGCAT GCGGGCACTC TTCTTTCACT GA
 
Protein sequence
MDHTDSADRP DAAHGQQHPI GVYLKIWGLL FVLSTLSYLV DYFHVQGVLR WVLIVVLMIA 
KAGLIVSIFM HMMWERLALV YAILVPPLCL LVLMVLMAAE AHHTFGMRAL FFH