Gene Bamb_6211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6211 
Symbol 
ID4315115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp782238 
End bp782849 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content68% 
IMG OID638154055 
Productheme/copper-type cytochrome/quinol oxidase subunit 3-like protein 
Protein accessionYP_778089 
Protein GI115360952 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGC TGCCGCGCCC CTTCGGTCCC GACGCGCAAT CGGTCTTGCC GAATGCGGGT 
CGCACGGGCC TGATCGTTTT CATGGCGGTG GCCACGACGT TGTTTTCCTT GCTGCTGCTC
GCCTATGGGA TGCGCATGCG CGAGCCCGAC TGGCAGCCGA TTCCGCATCC GGTGCTGCTG
TGGTGGAACA CCGGTGCGCT GGTGCTGGCC AGCATCGCGA TGCAGCGCGC CCGGCGGATG
ACTTTGCACC GCGCGGCGTG GCTGGTATCC GGCGGCGTGC TGGCGGCGCT GTTCGTGATC
GGGCAACTGA CCGCGTGGCG CGTGCTGGCC GCCGCCGGGC AGACCGTCAA CGTCAATCCT
TCGAACAGCT TCCTGTACCT GCTCACCGGC CTGCACGGAC TGCATGTGCT GGGCGGGCTG
GTGGCCTGGG TCGTCACGAT CGCGCTTGTG CGGCGCGCGG ACCCATTCCG GGCCCAGCGC
GCCATTGCGC TGTGTGCGAC TTACTGGCAT TTCCTGCTGG CTGTCTGGCT CGTGCTGCTG
GCGGCGATGT GGTGGATGAC CCCCGCGATC GTCGCCGCCA TCTGCGGGCC GCTGTATGGA
GCCGCGCCAT GA
 
Protein sequence
MTTLPRPFGP DAQSVLPNAG RTGLIVFMAV ATTLFSLLLL AYGMRMREPD WQPIPHPVLL 
WWNTGALVLA SIAMQRARRM TLHRAAWLVS GGVLAALFVI GQLTAWRVLA AAGQTVNVNP
SNSFLYLLTG LHGLHVLGGL VAWVVTIALV RRADPFRAQR AIALCATYWH FLLAVWLVLL
AAMWWMTPAI VAAICGPLYG AAP