| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6197 |
|---|
| Symbol | |
|---|
| ID | 4315101 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008392 |
|---|
| Strand | - |
|---|
| Start bp | 766011 |
|---|
| End bp | 768359 |
|---|
| Gene Length | 2349 bp |
|---|
| Protein Length | 782 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638154041 |
|---|
| Product | periplasmic sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_778075 |
|---|
| Protein GI | 115360938 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.350252 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCACCC GCGCGATGCC TAGGCGCCGC GCGTCGGGCT GGTACACCCT TCTGCTGCTC
GCGGTGGCGC TGATCGCGTG CGCGACCCAC CGCGCCGAAG CGACGGAAAA CGCTGCACAA
CTGGACGCGG TGTCGATCGT CGAGGATCGG GGCGCGACGA TGTCCGTCGA TCAGGCCGCC
GCGCGACTCG CGGCTGCGCC AACCGGCACG TCCGCGTCCG CTGCACGCCC GTCGTTCAAC
ATCGAGTTTT CCCGCTCGGC ATGGTGGGTC GCCGCGACGC TGGTCAATCA CGACAGCGTC
GAGCGCCCGC TGGTGCTGGC GATTCGCGAC GCACGTCTCG ACCATGCAGA CTTTTATGTC
GAGCGCGGCG GCGCGTGGAC GCTCGCCGCG CGCTTTCCGG CCGACCGCGG CGACGCGGAC
CATCCTGCTT CCCGATATCC GACGCTCGAC ACGACACTGC GCCCGGGCGA GCGGTTGCCC
GTGCTGATCC GCATCACGTC GCGCAAGGAA ATGCGGCTCG CGCCGTCCGT GTTCACGCCC
AACGCATGGC ACGCGTACGA ACTGCGCGCC GCGATGTGGA ACTTCGGCTT CTTCGGCGGC
CTGCTCGCAC TTGTCTGGTG TGCGCTGCTG ATCGGATTCT TTTCGCGCAG CGGCATGTTC
GTCGTGCTGG CCGTGCTGGC GCTGAGCACG ACGCTGTTCG AAGCGACGTA CCGCGGCTAT
ACCGTGATGT ATCTGTGGCC CGGCGCGTAC GAATGGTCGG CACGCGGCGA GGTGATCTTC
GTCTATCTGT CGGTCGCCTG CTTCATCGCA TTCATCCTGA TGGTCGCGCA CCGCGAGAAG
GCCAGCATGC CGATGCGTGC CGTCTACATC GCGTTCTTCG CGCTCGAATG CATCGGCATG
GCCGGCGCGG CGTACGGCGA CCTGCTCACC TTCACGTGGT TCTGCCTGCG GTTGAACACC
GTGATGGCGG TCGTGAACAT CGGCCTCGCG CTGACCTTCG CGATCCGGCG CACGCCGAGC
GCCCGCGTGA TGTTGATCGC CGTCGGGTTC GCGAGCTTCA ACATGCTGGT GCGCGTGCTC
GACGGACGCG ATGCGATACC GACGTGGCTG CTCTGGCTGA AATCCGACAT CCATCCGAAT
CCCGTGGTCG CGATCATCGG GCTCGCCACG CACCTGCTGG TGCTGGCCGC GTGGATCCAC
CACGTCGGCC GGCAACGCAC CGAGGCGCGC AAGCGGCTCG AGCAATGGCA GCTCACCGAA
CAGGATCGCC TGCGCGACGA GGTCGCGAAA CGCACGGTCG CGCTCAACGA TGCGCTGCAG
CAGGTGAGGA CGCACATGCA GCAGAAGATC GAGACGCTCG GCTACGTGAG CCACGACCTG
CGCGCGCCGC TGTCGACGAT CAATGGCTAC GCGAAGCTGC TGCTGCAAAG CGCGACCCGC
AGCCAGGCGC GGCTGATCCG CTCGATCGAC CGCAGCATCC GCTACCAGCT CACGCTGATC
GACGAGTTGC TGCAGTACAC GAAGTCCGAG CTGCAGCCGC TCGGCATCTC TCCGGACGCG
ACCGACCTGC CCGGCCTGCT GACCGACATC GGCGACTATG CGCTCGCGCT GTGCCAGCAG
CAGGACAACC GGTTCGACTA CCGGCCACTG ACGCCGCTGC CGCGCAAGCT GTCGATCGAC
GGCATCCGGC TGCAGCAGGT GCTGCTCAAC CTGCTGTCGA ATGCGTCGAA GTTCACGCGC
GACGGCACGG TCACGCTGTC GGTCGGCGCG TATCCGCAGG GGGATGCGTG GCGCATCGTG
TTCGAGGTCG CCGATACCGG GATCGGGATC GACATCGGCA AGACGAGCGA CATCTTCCGC
GCGTACCAGC AGGTTCAGGC GGTGAATGGC GGAACCGGGC TCGGGCTGTT CATCGCGCAG
CGGATCGTCG GCGCGATGAA CGGCGAGCTC TCCGTGACGA GCCAGCCGGG CGTCGGCACG
TCGTTCACGT TCCAGATCGT CGCACCGGCG ATCGGGCATG CGCTGATCCC GGCGTCGGCG
CTGATGCGGC CGGCCGAGCC GGTCGAACCC GACGAATCGC TGAGCGACGC GCATGCGATG
CGCTGCCCGT CGCCGGATGC GCTCGACGAG CTGGCCGTGC TCGCCAGCGA AGGCCGCCTC
ACCGATATCG AGGAATGGCT CGGCCAGCAT GCGCATGCGC CGCGCCATGC CGCGTTCGTG
CAGGCGATGC GCGAGCGTCT CGACGCGCTC GATCTGCACG CGATCGAGCG GCTGGCCGAG
TCGCTGAAAC GGATGGGTAT CGCCGATGCG TCGTTCGATG CGGAGCCGGA CATGGCAAGG
TCGGCGTGA
|
|---|
| Protein sequence | MITRAMPRRR ASGWYTLLLL AVALIACATH RAEATENAAQ LDAVSIVEDR GATMSVDQAA
ARLAAAPTGT SASAARPSFN IEFSRSAWWV AATLVNHDSV ERPLVLAIRD ARLDHADFYV
ERGGAWTLAA RFPADRGDAD HPASRYPTLD TTLRPGERLP VLIRITSRKE MRLAPSVFTP
NAWHAYELRA AMWNFGFFGG LLALVWCALL IGFFSRSGMF VVLAVLALST TLFEATYRGY
TVMYLWPGAY EWSARGEVIF VYLSVACFIA FILMVAHREK ASMPMRAVYI AFFALECIGM
AGAAYGDLLT FTWFCLRLNT VMAVVNIGLA LTFAIRRTPS ARVMLIAVGF ASFNMLVRVL
DGRDAIPTWL LWLKSDIHPN PVVAIIGLAT HLLVLAAWIH HVGRQRTEAR KRLEQWQLTE
QDRLRDEVAK RTVALNDALQ QVRTHMQQKI ETLGYVSHDL RAPLSTINGY AKLLLQSATR
SQARLIRSID RSIRYQLTLI DELLQYTKSE LQPLGISPDA TDLPGLLTDI GDYALALCQQ
QDNRFDYRPL TPLPRKLSID GIRLQQVLLN LLSNASKFTR DGTVTLSVGA YPQGDAWRIV
FEVADTGIGI DIGKTSDIFR AYQQVQAVNG GTGLGLFIAQ RIVGAMNGEL SVTSQPGVGT
SFTFQIVAPA IGHALIPASA LMRPAEPVEP DESLSDAHAM RCPSPDALDE LAVLASEGRL
TDIEEWLGQH AHAPRHAAFV QAMRERLDAL DLHAIERLAE SLKRMGIADA SFDAEPDMAR
SA
|
|---|
| |